Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacna1aP97445 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cacna1aP97445 Gm45444-201ENSMUST00000211394 898 ntBASIC21.04■□□□□ 0.96
Cacna1aP97445 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacna1aP97445 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Cacna1aP97445 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Cacna1aP97445 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.03■□□□□ 0.96
Cacna1aP97445 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1aP97445 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cacna1aP97445 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1aP97445 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1aP97445 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.01■□□□□ 0.95
Cacna1aP97445 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cacna1aP97445 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cacna1aP97445 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cacna1aP97445 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cacna1aP97445 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.99■□□□□ 0.95
Cacna1aP97445 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cacna1aP97445 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.99■□□□□ 0.95
Cacna1aP97445 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1aP97445 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1aP97445 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1aP97445 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Cacna1aP97445 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1aP97445 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1aP97445 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1aP97445 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.97■□□□□ 0.95
Cacna1aP97445 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.97■□□□□ 0.95
Cacna1aP97445 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.97■□□□□ 0.95
Cacna1aP97445 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.96■□□□□ 0.95
Cacna1aP97445 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1aP97445 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.96■□□□□ 0.95
Cacna1aP97445 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1aP97445 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cacna1aP97445 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1aP97445 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cacna1aP97445 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.95■□□□□ 0.94
Cacna1aP97445 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1aP97445 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cacna1aP97445 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1aP97445 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1aP97445 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1aP97445 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.94■□□□□ 0.94
Cacna1aP97445 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Cacna1aP97445 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.92■□□□□ 0.94
Cacna1aP97445 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1aP97445 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1aP97445 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1aP97445 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1aP97445 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1aP97445 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cacna1aP97445 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1aP97445 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1aP97445 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1aP97445 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.9■□□□□ 0.94
Cacna1aP97445 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cacna1aP97445 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cacna1aP97445 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Cacna1aP97445 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.89■□□□□ 0.94
Cacna1aP97445 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.89■□□□□ 0.94
Cacna1aP97445 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.89■□□□□ 0.94
Cacna1aP97445 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Cacna1aP97445 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacna1aP97445 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacna1aP97445 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacna1aP97445 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.88■□□□□ 0.93
Cacna1aP97445 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cacna1aP97445 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.88■□□□□ 0.93
Cacna1aP97445 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.88■□□□□ 0.93
Cacna1aP97445 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.87■□□□□ 0.93
Cacna1aP97445 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacna1aP97445 Amer2-203ENSMUST00000225247 2662 ntBASIC20.87■□□□□ 0.93
Cacna1aP97445 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cacna1aP97445 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacna1aP97445 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacna1aP97445 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.86■□□□□ 0.93
Cacna1aP97445 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.86■□□□□ 0.93
Cacna1aP97445 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cacna1aP97445 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.86■□□□□ 0.93
Cacna1aP97445 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.86■□□□□ 0.93
Cacna1aP97445 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1aP97445 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1aP97445 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1aP97445 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1aP97445 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.85■□□□□ 0.93
Cacna1aP97445 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1aP97445 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1aP97445 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1aP97445 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cacna1aP97445 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.83■□□□□ 0.93
Cacna1aP97445 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cacna1aP97445 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cacna1aP97445 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cacna1aP97445 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1aP97445 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1aP97445 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1aP97445 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cacna1aP97445 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1aP97445 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1aP97445 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms