Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp9xP70398 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp9xP70398 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp9xP70398 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Usp9xP70398 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Usp9xP70398 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp9xP70398 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp9xP70398 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp9xP70398 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp9xP70398 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp9xP70398 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp9xP70398 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp9xP70398 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Usp9xP70398 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.2■□□□□ 0.66
Usp9xP70398 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Usp9xP70398 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp9xP70398 Etf1-202ENSMUST00000180351 108 ntBASIC19.19■□□□□ 0.66
Usp9xP70398 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp9xP70398 Gm13241-201ENSMUST00000094493 780 ntBASIC19.19■□□□□ 0.66
Usp9xP70398 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp9xP70398 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp9xP70398 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp9xP70398 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp9xP70398 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Usp9xP70398 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp9xP70398 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp9xP70398 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp9xP70398 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp9xP70398 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Usp9xP70398 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp9xP70398 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp9xP70398 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.16■□□□□ 0.66
Usp9xP70398 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp9xP70398 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Usp9xP70398 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp9xP70398 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
Usp9xP70398 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp9xP70398 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp9xP70398 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.14■□□□□ 0.65
Usp9xP70398 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp9xP70398 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp9xP70398 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp9xP70398 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Usp9xP70398 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.13■□□□□ 0.65
Usp9xP70398 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp9xP70398 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp9xP70398 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp9xP70398 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Usp9xP70398 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.12■□□□□ 0.65
Usp9xP70398 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp9xP70398 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp9xP70398 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.12■□□□□ 0.65
Usp9xP70398 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.12■□□□□ 0.65
Usp9xP70398 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp9xP70398 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.11■□□□□ 0.65
Usp9xP70398 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Usp9xP70398 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp9xP70398 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp9xP70398 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp9xP70398 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp9xP70398 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp9xP70398 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Usp9xP70398 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Usp9xP70398 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp9xP70398 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.1■□□□□ 0.65
Usp9xP70398 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp9xP70398 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.1■□□□□ 0.65
Usp9xP70398 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.1■□□□□ 0.65
Usp9xP70398 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp9xP70398 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.09■□□□□ 0.65
Usp9xP70398 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.09■□□□□ 0.65
Usp9xP70398 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp9xP70398 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp9xP70398 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp9xP70398 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.07■□□□□ 0.64
Usp9xP70398 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp9xP70398 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp9xP70398 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp9xP70398 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp9xP70398 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp9xP70398 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.06■□□□□ 0.64
Usp9xP70398 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
Usp9xP70398 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp9xP70398 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Usp9xP70398 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp9xP70398 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.05■□□□□ 0.64
Usp9xP70398 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Usp9xP70398 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.04■□□□□ 0.64
Usp9xP70398 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.04■□□□□ 0.64
Usp9xP70398 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp9xP70398 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp9xP70398 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.04■□□□□ 0.64
Usp9xP70398 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp9xP70398 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp9xP70398 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp9xP70398 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp9xP70398 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp9xP70398 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp9xP70398 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Usp9xP70398 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms