Protein–RNA interactions for Protein: P68433

Hist1h3a, Histone H3.1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3aP68433 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hist1h3aP68433 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hist1h3aP68433 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h3aP68433 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h3aP68433 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h3aP68433 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h3aP68433 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h3aP68433 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hist1h3aP68433 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hist1h3aP68433 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hist1h3aP68433 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hist1h3aP68433 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hist1h3aP68433 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.58■□□□□ 0.72
Hist1h3aP68433 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hist1h3aP68433 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist1h3aP68433 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hist1h3aP68433 Terc-201ENSMUST00000082862 423 ntBASIC19.57■□□□□ 0.72
Hist1h3aP68433 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.57■□□□□ 0.72
Hist1h3aP68433 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h3aP68433 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h3aP68433 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h3aP68433 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.56■□□□□ 0.72
Hist1h3aP68433 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h3aP68433 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hist1h3aP68433 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.55■□□□□ 0.72
Hist1h3aP68433 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hist1h3aP68433 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h3aP68433 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h3aP68433 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h3aP68433 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h3aP68433 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h3aP68433 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.54■□□□□ 0.72
Hist1h3aP68433 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h3aP68433 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.54■□□□□ 0.72
Hist1h3aP68433 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hist1h3aP68433 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hist1h3aP68433 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hist1h3aP68433 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Hist1h3aP68433 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Hist1h3aP68433 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hist1h3aP68433 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Hist1h3aP68433 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.52■□□□□ 0.72
Hist1h3aP68433 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.52■□□□□ 0.72
Hist1h3aP68433 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hist1h3aP68433 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hist1h3aP68433 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hist1h3aP68433 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.52■□□□□ 0.72
Hist1h3aP68433 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h3aP68433 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.51■□□□□ 0.71
Hist1h3aP68433 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h3aP68433 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.51■□□□□ 0.71
Hist1h3aP68433 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h3aP68433 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h3aP68433 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h3aP68433 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h3aP68433 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h3aP68433 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h3aP68433 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Hist1h3aP68433 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h3aP68433 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Hist1h3aP68433 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h3aP68433 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h3aP68433 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h3aP68433 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hist1h3aP68433 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.49■□□□□ 0.71
Hist1h3aP68433 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hist1h3aP68433 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Hist1h3aP68433 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Hist1h3aP68433 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hist1h3aP68433 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hist1h3aP68433 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hist1h3aP68433 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hist1h3aP68433 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hist1h3aP68433 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
Hist1h3aP68433 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h3aP68433 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.47■□□□□ 0.71
Hist1h3aP68433 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.47■□□□□ 0.71
Hist1h3aP68433 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h3aP68433 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Hist1h3aP68433 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h3aP68433 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hist1h3aP68433 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h3aP68433 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Hist1h3aP68433 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hist1h3aP68433 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hist1h3aP68433 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Hist1h3aP68433 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Hist1h3aP68433 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hist1h3aP68433 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hist1h3aP68433 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3aP68433 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3aP68433 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3aP68433 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3aP68433 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.45■□□□□ 0.7
Hist1h3aP68433 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3aP68433 Gm6311-201ENSMUST00000073790 878 ntBASIC19.45■□□□□ 0.7
Hist1h3aP68433 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3aP68433 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.45■□□□□ 0.7
Hist1h3aP68433 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3aP68433 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms