Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cks1bP61025 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cks1bP61025 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cks1bP61025 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cks1bP61025 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cks1bP61025 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cks1bP61025 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cks1bP61025 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Cks1bP61025 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Cks1bP61025 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cks1bP61025 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cks1bP61025 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cks1bP61025 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cks1bP61025 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cks1bP61025 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks1bP61025 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cks1bP61025 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cks1bP61025 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Cks1bP61025 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cks1bP61025 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks1bP61025 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.87■□□□□ 0.13
Cks1bP61025 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks1bP61025 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cks1bP61025 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks1bP61025 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks1bP61025 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cks1bP61025 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cks1bP61025 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.86■□□□□ 0.13
Cks1bP61025 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks1bP61025 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cks1bP61025 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.85■□□□□ 0.13
Cks1bP61025 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks1bP61025 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Cks1bP61025 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks1bP61025 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Cks1bP61025 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cks1bP61025 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cks1bP61025 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Cks1bP61025 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cks1bP61025 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cks1bP61025 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cks1bP61025 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cks1bP61025 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cks1bP61025 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cks1bP61025 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks1bP61025 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks1bP61025 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks1bP61025 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC15.82■□□□□ 0.12
Cks1bP61025 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks1bP61025 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cks1bP61025 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks1bP61025 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks1bP61025 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cks1bP61025 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Cks1bP61025 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks1bP61025 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cks1bP61025 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cks1bP61025 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cks1bP61025 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Cks1bP61025 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Cks1bP61025 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cks1bP61025 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cks1bP61025 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cks1bP61025 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cks1bP61025 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cks1bP61025 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cks1bP61025 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cks1bP61025 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Cks1bP61025 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks1bP61025 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks1bP61025 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks1bP61025 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks1bP61025 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks1bP61025 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cks1bP61025 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.79■□□□□ 0.12
Cks1bP61025 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.78■□□□□ 0.12
Cks1bP61025 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cks1bP61025 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks1bP61025 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cks1bP61025 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks1bP61025 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks1bP61025 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cks1bP61025 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cks1bP61025 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.77■□□□□ 0.12
Cks1bP61025 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.77■□□□□ 0.12
Cks1bP61025 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cks1bP61025 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cks1bP61025 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Cks1bP61025 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cks1bP61025 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cks1bP61025 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cks1bP61025 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cks1bP61025 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cks1bP61025 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cks1bP61025 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cks1bP61025 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cks1bP61025 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC15.76■□□□□ 0.11
Cks1bP61025 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cks1bP61025 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cks1bP61025 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms