Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
BrafP28028 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BrafP28028 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
BrafP28028 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.81■■□□□ 1.08
BrafP28028 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BrafP28028 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BrafP28028 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BrafP28028 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BrafP28028 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BrafP28028 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
BrafP28028 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
BrafP28028 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
BrafP28028 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.79■■□□□ 1.08
BrafP28028 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BrafP28028 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BrafP28028 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BrafP28028 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BrafP28028 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.78■■□□□ 1.08
BrafP28028 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BrafP28028 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BrafP28028 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BrafP28028 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
BrafP28028 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BrafP28028 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BrafP28028 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
BrafP28028 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BrafP28028 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BrafP28028 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
BrafP28028 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BrafP28028 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BrafP28028 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.76■■□□□ 1.07
BrafP28028 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
BrafP28028 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BrafP28028 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BrafP28028 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
BrafP28028 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.75■■□□□ 1.07
BrafP28028 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
BrafP28028 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BrafP28028 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BrafP28028 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BrafP28028 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BrafP28028 Gm11599-201ENSMUST00000118720 878 ntBASIC21.74■■□□□ 1.07
BrafP28028 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
BrafP28028 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.74■■□□□ 1.07
BrafP28028 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
BrafP28028 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
BrafP28028 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
BrafP28028 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
BrafP28028 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
BrafP28028 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
BrafP28028 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BrafP28028 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
BrafP28028 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BrafP28028 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BrafP28028 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BrafP28028 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
BrafP28028 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BrafP28028 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BrafP28028 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BrafP28028 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BrafP28028 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BrafP28028 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.7■■□□□ 1.06
BrafP28028 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
BrafP28028 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.7■■□□□ 1.06
BrafP28028 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BrafP28028 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BrafP28028 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BrafP28028 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
BrafP28028 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BrafP28028 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BrafP28028 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BrafP28028 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
BrafP28028 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.67■■□□□ 1.06
BrafP28028 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BrafP28028 Gm4799-201ENSMUST00000095396 657 ntBASIC21.67■■□□□ 1.06
BrafP28028 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BrafP28028 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.66■■□□□ 1.06
BrafP28028 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
BrafP28028 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
BrafP28028 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
BrafP28028 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BrafP28028 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
BrafP28028 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
BrafP28028 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
BrafP28028 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
BrafP28028 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
BrafP28028 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BrafP28028 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
BrafP28028 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
BrafP28028 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BrafP28028 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BrafP28028 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BrafP28028 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BrafP28028 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.62■■□□□ 1.05
BrafP28028 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.62■■□□□ 1.05
BrafP28028 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
BrafP28028 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BrafP28028 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BrafP28028 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
BrafP28028 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms