Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Clk1P22518 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Clk1P22518 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Clk1P22518 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clk1P22518 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Clk1P22518 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clk1P22518 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.66■□□□□ 0.9
Clk1P22518 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.66■□□□□ 0.9
Clk1P22518 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.65■□□□□ 0.9
Clk1P22518 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clk1P22518 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Clk1P22518 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.65■□□□□ 0.9
Clk1P22518 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.65■□□□□ 0.9
Clk1P22518 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clk1P22518 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Clk1P22518 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clk1P22518 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clk1P22518 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clk1P22518 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clk1P22518 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Clk1P22518 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Clk1P22518 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Clk1P22518 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clk1P22518 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clk1P22518 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.62■□□□□ 0.89
Clk1P22518 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clk1P22518 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clk1P22518 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clk1P22518 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clk1P22518 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clk1P22518 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clk1P22518 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.61■□□□□ 0.89
Clk1P22518 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Clk1P22518 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.6■□□□□ 0.89
Clk1P22518 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clk1P22518 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clk1P22518 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clk1P22518 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clk1P22518 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clk1P22518 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clk1P22518 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.59■□□□□ 0.89
Clk1P22518 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clk1P22518 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clk1P22518 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Clk1P22518 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.59■□□□□ 0.89
Clk1P22518 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.59■□□□□ 0.89
Clk1P22518 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Clk1P22518 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clk1P22518 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clk1P22518 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Clk1P22518 Gm45364-201ENSMUST00000210883 159 ntBASIC20.58■□□□□ 0.89
Clk1P22518 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clk1P22518 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clk1P22518 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Clk1P22518 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk1P22518 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk1P22518 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk1P22518 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Clk1P22518 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clk1P22518 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk1P22518 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk1P22518 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.56■□□□□ 0.88
Clk1P22518 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Clk1P22518 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk1P22518 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk1P22518 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.56■□□□□ 0.88
Clk1P22518 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.56■□□□□ 0.88
Clk1P22518 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.56■□□□□ 0.88
Clk1P22518 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk1P22518 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.55■□□□□ 0.88
Clk1P22518 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk1P22518 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clk1P22518 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.55■□□□□ 0.88
Clk1P22518 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.55■□□□□ 0.88
Clk1P22518 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk1P22518 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clk1P22518 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clk1P22518 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.54■□□□□ 0.88
Clk1P22518 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk1P22518 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clk1P22518 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Clk1P22518 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk1P22518 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk1P22518 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk1P22518 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clk1P22518 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Clk1P22518 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clk1P22518 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clk1P22518 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Clk1P22518 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Clk1P22518 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Clk1P22518 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk1P22518 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Clk1P22518 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk1P22518 Gm6311-201ENSMUST00000073790 878 ntBASIC20.51■□□□□ 0.87
Clk1P22518 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk1P22518 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Clk1P22518 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Clk1P22518 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk1P22518 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms