Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TP20293 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TP20293 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21■□□□□ 0.95
TP20293 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.99■□□□□ 0.95
TP20293 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TP20293 Gm6311-201ENSMUST00000073790 878 ntBASIC20.99■□□□□ 0.95
TP20293 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TP20293 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.98■□□□□ 0.95
TP20293 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TP20293 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.98■□□□□ 0.95
TP20293 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.98■□□□□ 0.95
TP20293 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TP20293 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TP20293 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TP20293 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TP20293 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TP20293 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TP20293 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TP20293 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TP20293 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TP20293 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.96■□□□□ 0.95
TP20293 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TP20293 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.95■□□□□ 0.94
TP20293 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.95■□□□□ 0.94
TP20293 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TP20293 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.94■□□□□ 0.94
TP20293 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TP20293 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TP20293 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TP20293 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TP20293 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TP20293 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TP20293 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TP20293 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TP20293 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TP20293 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TP20293 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TP20293 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TP20293 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TP20293 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TP20293 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TP20293 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TP20293 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TP20293 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TP20293 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TP20293 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TP20293 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TP20293 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TP20293 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TP20293 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TP20293 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TP20293 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TP20293 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
TP20293 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TP20293 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TP20293 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TP20293 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.93
TP20293 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TP20293 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TP20293 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TP20293 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TP20293 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TP20293 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TP20293 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TP20293 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TP20293 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TP20293 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TP20293 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TP20293 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.87■□□□□ 0.93
TP20293 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TP20293 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TP20293 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TP20293 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
TP20293 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TP20293 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TP20293 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
TP20293 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TP20293 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TP20293 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TP20293 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TP20293 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TP20293 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TP20293 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.85■□□□□ 0.93
TP20293 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.85■□□□□ 0.93
TP20293 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TP20293 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.84■□□□□ 0.93
TP20293 Terc-201ENSMUST00000082862 423 ntBASIC20.84■□□□□ 0.93
TP20293 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TP20293 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TP20293 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.84■□□□□ 0.93
TP20293 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
TP20293 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TP20293 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TP20293 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TP20293 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TP20293 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TP20293 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TP20293 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TP20293 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.81■□□□□ 0.92
TP20293 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms