Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sod1P08228 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sod1P08228 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sod1P08228 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Sod1P08228 Gm13238-201ENSMUST00000117655 780 ntBASIC21.67■■□□□ 1.06
Sod1P08228 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Sod1P08228 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sod1P08228 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sod1P08228 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sod1P08228 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.65■■□□□ 1.06
Sod1P08228 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Sod1P08228 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sod1P08228 Gm43566-201ENSMUST00000196851 808 ntBASIC21.65■■□□□ 1.06
Sod1P08228 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Sod1P08228 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sod1P08228 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sod1P08228 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sod1P08228 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sod1P08228 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sod1P08228 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.64■■□□□ 1.05
Sod1P08228 Gm22567-201ENSMUST00000175542 342 ntBASIC21.64■■□□□ 1.05
Sod1P08228 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sod1P08228 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sod1P08228 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sod1P08228 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sod1P08228 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sod1P08228 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.63■■□□□ 1.05
Sod1P08228 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sod1P08228 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sod1P08228 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.62■■□□□ 1.05
Sod1P08228 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sod1P08228 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sod1P08228 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sod1P08228 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.62■■□□□ 1.05
Sod1P08228 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sod1P08228 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sod1P08228 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Sod1P08228 Gm45444-201ENSMUST00000211394 898 ntBASIC21.61■■□□□ 1.05
Sod1P08228 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.61■■□□□ 1.05
Sod1P08228 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Sod1P08228 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.6■■□□□ 1.05
Sod1P08228 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.6■■□□□ 1.05
Sod1P08228 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sod1P08228 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sod1P08228 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.59■■□□□ 1.05
Sod1P08228 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sod1P08228 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sod1P08228 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Sod1P08228 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Sod1P08228 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.58■■□□□ 1.04
Sod1P08228 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.58■■□□□ 1.04
Sod1P08228 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.57■■□□□ 1.04
Sod1P08228 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sod1P08228 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sod1P08228 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sod1P08228 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sod1P08228 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sod1P08228 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sod1P08228 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sod1P08228 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.54■■□□□ 1.04
Sod1P08228 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.54■■□□□ 1.04
Sod1P08228 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.54■■□□□ 1.04
Sod1P08228 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sod1P08228 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Sod1P08228 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Sod1P08228 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sod1P08228 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sod1P08228 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Sod1P08228 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sod1P08228 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sod1P08228 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sod1P08228 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Sod1P08228 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sod1P08228 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sod1P08228 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sod1P08228 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sod1P08228 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.51■■□□□ 1.03
Sod1P08228 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sod1P08228 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sod1P08228 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sod1P08228 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sod1P08228 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.5■■□□□ 1.03
Sod1P08228 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Sod1P08228 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.5■■□□□ 1.03
Sod1P08228 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sod1P08228 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
Sod1P08228 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sod1P08228 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.48■■□□□ 1.03
Sod1P08228 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.48■■□□□ 1.03
Sod1P08228 Gm15820-201ENSMUST00000201566 728 ntBASIC21.48■■□□□ 1.03
Sod1P08228 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.48■■□□□ 1.03
Sod1P08228 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.48■■□□□ 1.03
Sod1P08228 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sod1P08228 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sod1P08228 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sod1P08228 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sod1P08228 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Sod1P08228 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sod1P08228 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sod1P08228 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 144.8 ms