Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ercc1P07903 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ercc1P07903 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc1P07903 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc1P07903 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ercc1P07903 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc1P07903 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.76■□□□□ 0.59
Ercc1P07903 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.76■□□□□ 0.59
Ercc1P07903 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc1P07903 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc1P07903 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ercc1P07903 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ercc1P07903 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc1P07903 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc1P07903 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc1P07903 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc1P07903 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc1P07903 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc1P07903 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc1P07903 Gm30023-201ENSMUST00000197970 889 ntBASIC18.74■□□□□ 0.59
Ercc1P07903 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc1P07903 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc1P07903 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ercc1P07903 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc1P07903 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc1P07903 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc1P07903 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc1P07903 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc1P07903 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.73■□□□□ 0.59
Ercc1P07903 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc1P07903 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.72■□□□□ 0.59
Ercc1P07903 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc1P07903 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc1P07903 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc1P07903 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc1P07903 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc1P07903 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.71■□□□□ 0.59
Ercc1P07903 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc1P07903 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc1P07903 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc1P07903 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc1P07903 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ercc1P07903 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Ercc1P07903 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.71■□□□□ 0.59
Ercc1P07903 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Ercc1P07903 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.7■□□□□ 0.58
Ercc1P07903 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc1P07903 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc1P07903 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc1P07903 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc1P07903 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc1P07903 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc1P07903 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ercc1P07903 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc1P07903 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc1P07903 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc1P07903 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc1P07903 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc1P07903 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ercc1P07903 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.69■□□□□ 0.58
Ercc1P07903 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc1P07903 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc1P07903 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc1P07903 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ercc1P07903 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc1P07903 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc1P07903 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ercc1P07903 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc1P07903 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc1P07903 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc1P07903 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc1P07903 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc1P07903 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc1P07903 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc1P07903 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.66■□□□□ 0.58
Ercc1P07903 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc1P07903 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc1P07903 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc1P07903 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc1P07903 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc1P07903 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc1P07903 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Ercc1P07903 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ercc1P07903 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc1P07903 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ercc1P07903 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ercc1P07903 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ercc1P07903 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc1P07903 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc1P07903 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ercc1P07903 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc1P07903 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc1P07903 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc1P07903 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ercc1P07903 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ercc1P07903 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ercc1P07903 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ercc1P07903 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ercc1P07903 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ercc1P07903 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms