Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P06344 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P06344 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P06344 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.09■□□□□ 0.81
P06344 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.09■□□□□ 0.81
P06344 Gm27502-201ENSMUST00000183495 199 ntBASIC20.09■□□□□ 0.81
P06344 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.09■□□□□ 0.81
P06344 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P06344 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P06344 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
P06344 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P06344 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.08■□□□□ 0.81
P06344 Gm12366-201ENSMUST00000121722 873 ntBASIC20.08■□□□□ 0.81
P06344 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.08■□□□□ 0.81
P06344 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.08■□□□□ 0.81
P06344 Gm5786-201ENSMUST00000085368 882 ntBASIC20.08■□□□□ 0.81
P06344 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.08■□□□□ 0.81
P06344 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
P06344 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P06344 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
P06344 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P06344 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
P06344 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P06344 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P06344 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P06344 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
P06344 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P06344 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.05■□□□□ 0.8
P06344 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P06344 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P06344 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P06344 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P06344 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
P06344 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P06344 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
P06344 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
P06344 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
P06344 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.04■□□□□ 0.8
P06344 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.04■□□□□ 0.8
P06344 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P06344 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P06344 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P06344 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
P06344 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P06344 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P06344 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P06344 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P06344 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P06344 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
P06344 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
P06344 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.02■□□□□ 0.8
P06344 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
P06344 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
P06344 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P06344 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
P06344 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P06344 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P06344 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P06344 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20■□□□□ 0.79
P06344 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P06344 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20■□□□□ 0.79
P06344 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
P06344 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.99■□□□□ 0.79
P06344 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
P06344 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06344 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
P06344 Gm14523-201ENSMUST00000117260 558 ntBASIC19.99■□□□□ 0.79
P06344 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06344 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.99■□□□□ 0.79
P06344 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06344 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
P06344 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.98■□□□□ 0.79
P06344 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P06344 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P06344 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
P06344 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
P06344 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.97■□□□□ 0.79
P06344 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.97■□□□□ 0.79
P06344 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P06344 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P06344 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
P06344 Gm7332-201ENSMUST00000118351 454 ntBASIC19.96■□□□□ 0.79
P06344 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
P06344 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P06344 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
P06344 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.96■□□□□ 0.79
P06344 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
P06344 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P06344 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
P06344 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P06344 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P06344 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P06344 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.94■□□□□ 0.78
P06344 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
P06344 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
P06344 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.93■□□□□ 0.78
P06344 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
P06344 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
P06344 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
P06344 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms