Protein–RNA interactions for Protein: P04943

Ig kappa chain V-VI region NQ6-8.3.1, mousemouse

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04943 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.19■□□□□ 0.5
P04943 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04943 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04943 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04943 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
P04943 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
P04943 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.18■□□□□ 0.5
P04943 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
P04943 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04943 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.18■□□□□ 0.5
P04943 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P04943 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
P04943 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P04943 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P04943 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04943 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04943 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04943 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.16■□□□□ 0.5
P04943 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
P04943 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04943 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04943 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04943 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04943 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
P04943 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.15■□□□□ 0.5
P04943 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P04943 Gm6311-201ENSMUST00000073790 878 ntBASIC18.15■□□□□ 0.5
P04943 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
P04943 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P04943 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.14■□□□□ 0.49
P04943 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
P04943 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P04943 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
P04943 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P04943 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P04943 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
P04943 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.13■□□□□ 0.49
P04943 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
P04943 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
P04943 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P04943 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.13■□□□□ 0.49
P04943 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P04943 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
P04943 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P04943 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.13■□□□□ 0.49
P04943 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.13■□□□□ 0.49
P04943 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
P04943 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04943 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04943 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.12■□□□□ 0.49
P04943 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
P04943 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
P04943 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04943 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04943 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P04943 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P04943 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
P04943 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P04943 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.1■□□□□ 0.49
P04943 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04943 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
P04943 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04943 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04943 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04943 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.09■□□□□ 0.49
P04943 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04943 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
P04943 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
P04943 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04943 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04943 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
P04943 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
P04943 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.08■□□□□ 0.49
P04943 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04943 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.08■□□□□ 0.48
P04943 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04943 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04943 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
P04943 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04943 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04943 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04943 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04943 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04943 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
P04943 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04943 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
P04943 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
P04943 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04943 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04943 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.05■□□□□ 0.48
P04943 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.05■□□□□ 0.48
P04943 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
P04943 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.05■□□□□ 0.48
P04943 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04943 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
P04943 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P04943 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
P04943 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P04943 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P04943 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms