Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.49■□□□□ 0.87
P01852 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01852 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01852 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01852 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
P01852 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01852 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01852 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
P01852 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P01852 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
P01852 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
P01852 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P01852 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P01852 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P01852 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
P01852 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
P01852 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.45■□□□□ 0.86
P01852 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
P01852 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
P01852 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
P01852 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
P01852 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
P01852 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.45■□□□□ 0.86
P01852 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
P01852 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P01852 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P01852 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P01852 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P01852 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
P01852 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.43■□□□□ 0.86
P01852 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
P01852 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
P01852 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
P01852 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.42■□□□□ 0.86
P01852 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
P01852 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
P01852 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.42■□□□□ 0.86
P01852 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
P01852 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
P01852 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
P01852 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.42■□□□□ 0.86
P01852 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
P01852 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
P01852 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
P01852 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
P01852 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
P01852 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
P01852 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
P01852 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.4■□□□□ 0.86
P01852 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
P01852 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P01852 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
P01852 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
P01852 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P01852 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.39■□□□□ 0.85
P01852 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
P01852 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P01852 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P01852 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
P01852 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
P01852 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P01852 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P01852 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
P01852 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.37■□□□□ 0.85
P01852 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P01852 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P01852 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P01852 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.37■□□□□ 0.85
P01852 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P01852 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
P01852 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P01852 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P01852 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P01852 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
P01852 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
P01852 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P01852 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P01852 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P01852 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
P01852 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P01852 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
P01852 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P01852 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P01852 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P01852 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P01852 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
P01852 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
P01852 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
P01852 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.33■□□□□ 0.85
P01852 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.33■□□□□ 0.85
P01852 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
P01852 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
P01852 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
P01852 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
P01852 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.32■□□□□ 0.84
P01852 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P01852 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.32■□□□□ 0.84
P01852 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
P01852 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
P01852 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms