Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.36■■□□□ 1.01
Hcn1O88704 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hcn1O88704 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hcn1O88704 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hcn1O88704 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hcn1O88704 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hcn1O88704 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hcn1O88704 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hcn1O88704 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hcn1O88704 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hcn1O88704 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hcn1O88704 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hcn1O88704 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hcn1O88704 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.34■■□□□ 1.01
Hcn1O88704 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.34■■□□□ 1.01
Hcn1O88704 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hcn1O88704 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Hcn1O88704 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Hcn1O88704 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Hcn1O88704 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Hcn1O88704 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.33■■□□□ 1.01
Hcn1O88704 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.33■■□□□ 1.01
Hcn1O88704 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hcn1O88704 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.33■■□□□ 1.01
Hcn1O88704 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Hcn1O88704 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
Hcn1O88704 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Hcn1O88704 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Hcn1O88704 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hcn1O88704 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Hcn1O88704 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Hcn1O88704 Mir3960-201ENSMUST00000198213 73 ntBASIC21.32■■□□□ 1
Hcn1O88704 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hcn1O88704 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.32■■□□□ 1
Hcn1O88704 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Hcn1O88704 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.32■■□□□ 1
Hcn1O88704 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hcn1O88704 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Hcn1O88704 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hcn1O88704 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.31■■□□□ 1
Hcn1O88704 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Hcn1O88704 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.3■■□□□ 1
Hcn1O88704 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hcn1O88704 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hcn1O88704 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Hcn1O88704 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hcn1O88704 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hcn1O88704 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Hcn1O88704 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Hcn1O88704 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hcn1O88704 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hcn1O88704 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Hcn1O88704 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hcn1O88704 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.29■■□□□ 1
Hcn1O88704 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.29■■□□□ 1
Hcn1O88704 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Hcn1O88704 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.29■■□□□ 1
Hcn1O88704 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hcn1O88704 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hcn1O88704 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hcn1O88704 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Hcn1O88704 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.28■■□□□ 1
Hcn1O88704 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hcn1O88704 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hcn1O88704 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hcn1O88704 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hcn1O88704 Gm45364-201ENSMUST00000210883 159 ntBASIC21.27■■□□□ 1
Hcn1O88704 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hcn1O88704 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Hcn1O88704 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hcn1O88704 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hcn1O88704 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hcn1O88704 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hcn1O88704 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Hcn1O88704 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hcn1O88704 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hcn1O88704 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Hcn1O88704 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hcn1O88704 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hcn1O88704 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hcn1O88704 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.24■□□□□ 0.99
Hcn1O88704 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hcn1O88704 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hcn1O88704 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Hcn1O88704 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.23■□□□□ 0.99
Hcn1O88704 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Hcn1O88704 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hcn1O88704 Gm11175-201ENSMUST00000116172 543 ntBASIC21.22■□□□□ 0.99
Hcn1O88704 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hcn1O88704 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Hcn1O88704 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.22■□□□□ 0.99
Hcn1O88704 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hcn1O88704 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Hcn1O88704 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hcn1O88704 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Hcn1O88704 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hcn1O88704 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hcn1O88704 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hcn1O88704 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hcn1O88704 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms