Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf17O88472 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.35■■□□□ 1.01
Tnfrsf17O88472 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf17O88472 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Tnfrsf17O88472 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf17O88472 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.34■■□□□ 1.01
Tnfrsf17O88472 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf17O88472 Gm13241-201ENSMUST00000094493 780 ntBASIC21.34■■□□□ 1.01
Tnfrsf17O88472 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf17O88472 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf17O88472 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Tnfrsf17O88472 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.33■■□□□ 1.01
Tnfrsf17O88472 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Tnfrsf17O88472 Gm10232-201ENSMUST00000089221 720 ntBASIC21.33■■□□□ 1.01
Tnfrsf17O88472 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Tnfrsf17O88472 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.32■■□□□ 1
Tnfrsf17O88472 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf17O88472 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf17O88472 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.31■■□□□ 1
Tnfrsf17O88472 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.31■■□□□ 1
Tnfrsf17O88472 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf17O88472 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Tnfrsf17O88472 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.3■■□□□ 1
Tnfrsf17O88472 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf17O88472 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf17O88472 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.3■■□□□ 1
Tnfrsf17O88472 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf17O88472 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
Tnfrsf17O88472 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf17O88472 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf17O88472 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf17O88472 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnfrsf17O88472 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Tnfrsf17O88472 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnfrsf17O88472 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnfrsf17O88472 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Tnfrsf17O88472 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tnfrsf17O88472 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.27■■□□□ 1
Tnfrsf17O88472 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.27■■□□□ 1
Tnfrsf17O88472 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.27■■□□□ 1
Tnfrsf17O88472 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.27■■□□□ 1
Tnfrsf17O88472 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.26■□□□□ 0.99
Tnfrsf17O88472 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf17O88472 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf17O88472 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.26■□□□□ 0.99
Tnfrsf17O88472 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.26■□□□□ 0.99
Tnfrsf17O88472 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.26■□□□□ 0.99
Tnfrsf17O88472 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf17O88472 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf17O88472 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.25■□□□□ 0.99
Tnfrsf17O88472 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf17O88472 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf17O88472 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tnfrsf17O88472 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.24■□□□□ 0.99
Tnfrsf17O88472 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Tnfrsf17O88472 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tnfrsf17O88472 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tnfrsf17O88472 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tnfrsf17O88472 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.23■□□□□ 0.99
Tnfrsf17O88472 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Tnfrsf17O88472 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfrsf17O88472 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfrsf17O88472 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfrsf17O88472 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfrsf17O88472 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Tnfrsf17O88472 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfrsf17O88472 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Tnfrsf17O88472 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnfrsf17O88472 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnfrsf17O88472 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.21■□□□□ 0.99
Tnfrsf17O88472 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tnfrsf17O88472 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.2■□□□□ 0.98
Tnfrsf17O88472 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfrsf17O88472 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfrsf17O88472 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfrsf17O88472 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfrsf17O88472 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tnfrsf17O88472 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnfrsf17O88472 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.19■□□□□ 0.98
Tnfrsf17O88472 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tnfrsf17O88472 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.19■□□□□ 0.98
Tnfrsf17O88472 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Tnfrsf17O88472 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnfrsf17O88472 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnfrsf17O88472 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf17O88472 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf17O88472 Gm21956-201ENSMUST00000179946 522 ntBASIC21.18■□□□□ 0.98
Tnfrsf17O88472 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.18■□□□□ 0.98
Tnfrsf17O88472 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf17O88472 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf17O88472 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf17O88472 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf17O88472 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfrsf17O88472 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Tnfrsf17O88472 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Tnfrsf17O88472 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfrsf17O88472 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tnfrsf17O88472 Gm9847-201ENSMUST00000052528 599 ntBASIC21.16■□□□□ 0.98
Tnfrsf17O88472 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Tnfrsf17O88472 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms