Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tgfbr3O88393 Gm43566-201ENSMUST00000196851 808 ntBASIC21.66■■□□□ 1.06
Tgfbr3O88393 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.66■■□□□ 1.06
Tgfbr3O88393 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.66■■□□□ 1.06
Tgfbr3O88393 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tgfbr3O88393 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.65■■□□□ 1.06
Tgfbr3O88393 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tgfbr3O88393 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tgfbr3O88393 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.65■■□□□ 1.06
Tgfbr3O88393 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.65■■□□□ 1.06
Tgfbr3O88393 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.65■■□□□ 1.06
Tgfbr3O88393 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.65■■□□□ 1.06
Tgfbr3O88393 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.65■■□□□ 1.06
Tgfbr3O88393 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tgfbr3O88393 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tgfbr3O88393 Gm15820-201ENSMUST00000201566 728 ntBASIC21.64■■□□□ 1.05
Tgfbr3O88393 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tgfbr3O88393 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Tgfbr3O88393 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tgfbr3O88393 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Tgfbr3O88393 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tgfbr3O88393 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.62■■□□□ 1.05
Tgfbr3O88393 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tgfbr3O88393 Gm45444-201ENSMUST00000211394 898 ntBASIC21.62■■□□□ 1.05
Tgfbr3O88393 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tgfbr3O88393 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tgfbr3O88393 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tgfbr3O88393 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tgfbr3O88393 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.61■■□□□ 1.05
Tgfbr3O88393 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Tgfbr3O88393 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tgfbr3O88393 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tgfbr3O88393 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tgfbr3O88393 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tgfbr3O88393 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tgfbr3O88393 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tgfbr3O88393 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.59■■□□□ 1.05
Tgfbr3O88393 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tgfbr3O88393 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Tgfbr3O88393 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Tgfbr3O88393 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tgfbr3O88393 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tgfbr3O88393 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.57■■□□□ 1.04
Tgfbr3O88393 Rps24-207ENSMUST00000224568 714 ntBASIC21.57■■□□□ 1.04
Tgfbr3O88393 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.57■■□□□ 1.04
Tgfbr3O88393 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tgfbr3O88393 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tgfbr3O88393 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tgfbr3O88393 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tgfbr3O88393 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tgfbr3O88393 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tgfbr3O88393 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.55■■□□□ 1.04
Tgfbr3O88393 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Tgfbr3O88393 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tgfbr3O88393 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tgfbr3O88393 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tgfbr3O88393 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tgfbr3O88393 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tgfbr3O88393 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tgfbr3O88393 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tgfbr3O88393 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.53■■□□□ 1.04
Tgfbr3O88393 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.53■■□□□ 1.04
Tgfbr3O88393 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tgfbr3O88393 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tgfbr3O88393 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tgfbr3O88393 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tgfbr3O88393 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Tgfbr3O88393 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.52■■□□□ 1.03
Tgfbr3O88393 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Tgfbr3O88393 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.51■■□□□ 1.03
Tgfbr3O88393 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.51■■□□□ 1.03
Tgfbr3O88393 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Tgfbr3O88393 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tgfbr3O88393 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tgfbr3O88393 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tgfbr3O88393 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tgfbr3O88393 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tgfbr3O88393 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tgfbr3O88393 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tgfbr3O88393 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tgfbr3O88393 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Tgfbr3O88393 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tgfbr3O88393 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tgfbr3O88393 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.48■■□□□ 1.03
Tgfbr3O88393 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Tgfbr3O88393 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tgfbr3O88393 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.48■■□□□ 1.03
Tgfbr3O88393 Gm45102-201ENSMUST00000207427 857 ntBASIC21.48■■□□□ 1.03
Tgfbr3O88393 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tgfbr3O88393 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Tgfbr3O88393 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tgfbr3O88393 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Tgfbr3O88393 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tgfbr3O88393 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tgfbr3O88393 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tgfbr3O88393 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tgfbr3O88393 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Tgfbr3O88393 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tgfbr3O88393 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Tgfbr3O88393 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms