Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pfdn2O70591 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pfdn2O70591 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pfdn2O70591 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pfdn2O70591 Gm9397-201ENSMUST00000200125 605 ntBASIC18.54■□□□□ 0.56
Pfdn2O70591 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pfdn2O70591 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pfdn2O70591 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pfdn2O70591 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pfdn2O70591 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pfdn2O70591 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pfdn2O70591 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pfdn2O70591 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pfdn2O70591 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pfdn2O70591 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pfdn2O70591 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pfdn2O70591 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pfdn2O70591 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pfdn2O70591 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pfdn2O70591 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.51■□□□□ 0.55
Pfdn2O70591 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.51■□□□□ 0.55
Pfdn2O70591 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pfdn2O70591 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pfdn2O70591 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pfdn2O70591 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.5■□□□□ 0.55
Pfdn2O70591 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Pfdn2O70591 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pfdn2O70591 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pfdn2O70591 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pfdn2O70591 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pfdn2O70591 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pfdn2O70591 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Pfdn2O70591 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pfdn2O70591 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.49■□□□□ 0.55
Pfdn2O70591 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pfdn2O70591 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.49■□□□□ 0.55
Pfdn2O70591 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pfdn2O70591 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.49■□□□□ 0.55
Pfdn2O70591 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pfdn2O70591 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pfdn2O70591 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pfdn2O70591 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pfdn2O70591 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pfdn2O70591 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pfdn2O70591 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pfdn2O70591 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pfdn2O70591 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.48■□□□□ 0.55
Pfdn2O70591 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pfdn2O70591 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pfdn2O70591 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pfdn2O70591 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pfdn2O70591 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.47■□□□□ 0.55
Pfdn2O70591 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pfdn2O70591 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pfdn2O70591 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pfdn2O70591 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pfdn2O70591 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pfdn2O70591 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pfdn2O70591 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.46■□□□□ 0.55
Pfdn2O70591 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pfdn2O70591 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.46■□□□□ 0.55
Pfdn2O70591 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pfdn2O70591 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pfdn2O70591 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pfdn2O70591 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pfdn2O70591 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pfdn2O70591 Gm45855-201ENSMUST00000212546 880 ntBASIC18.44■□□□□ 0.54
Pfdn2O70591 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pfdn2O70591 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pfdn2O70591 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pfdn2O70591 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pfdn2O70591 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pfdn2O70591 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pfdn2O70591 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pfdn2O70591 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Pfdn2O70591 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pfdn2O70591 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pfdn2O70591 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pfdn2O70591 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pfdn2O70591 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pfdn2O70591 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pfdn2O70591 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.41■□□□□ 0.54
Pfdn2O70591 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pfdn2O70591 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pfdn2O70591 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.41■□□□□ 0.54
Pfdn2O70591 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pfdn2O70591 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pfdn2O70591 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pfdn2O70591 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pfdn2O70591 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pfdn2O70591 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pfdn2O70591 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pfdn2O70591 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pfdn2O70591 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pfdn2O70591 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pfdn2O70591 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pfdn2O70591 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pfdn2O70591 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pfdn2O70591 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.38■□□□□ 0.53
Pfdn2O70591 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms