Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rdh5O55240 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rdh5O55240 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rdh5O55240 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rdh5O55240 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rdh5O55240 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rdh5O55240 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rdh5O55240 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rdh5O55240 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.25■□□□□ 0.99
Rdh5O55240 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rdh5O55240 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rdh5O55240 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rdh5O55240 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rdh5O55240 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rdh5O55240 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.24■□□□□ 0.99
Rdh5O55240 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
Rdh5O55240 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Rdh5O55240 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.23■□□□□ 0.99
Rdh5O55240 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rdh5O55240 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rdh5O55240 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh5O55240 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rdh5O55240 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh5O55240 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rdh5O55240 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.22■□□□□ 0.99
Rdh5O55240 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.22■□□□□ 0.99
Rdh5O55240 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh5O55240 Gm6311-201ENSMUST00000073790 878 ntBASIC21.22■□□□□ 0.99
Rdh5O55240 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh5O55240 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh5O55240 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.21■□□□□ 0.99
Rdh5O55240 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rdh5O55240 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rdh5O55240 Mir6538-201ENSMUST00000183713 110 ntBASIC21.21■□□□□ 0.99
Rdh5O55240 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rdh5O55240 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.2■□□□□ 0.98
Rdh5O55240 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rdh5O55240 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh5O55240 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh5O55240 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh5O55240 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh5O55240 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Rdh5O55240 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.17■□□□□ 0.98
Rdh5O55240 Terc-201ENSMUST00000082862 423 ntBASIC21.17■□□□□ 0.98
Rdh5O55240 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh5O55240 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh5O55240 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh5O55240 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh5O55240 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rdh5O55240 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rdh5O55240 Gm11175-201ENSMUST00000116172 543 ntBASIC21.16■□□□□ 0.98
Rdh5O55240 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.16■□□□□ 0.98
Rdh5O55240 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rdh5O55240 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh5O55240 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.15■□□□□ 0.98
Rdh5O55240 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh5O55240 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh5O55240 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh5O55240 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh5O55240 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rdh5O55240 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.15■□□□□ 0.98
Rdh5O55240 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh5O55240 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh5O55240 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh5O55240 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh5O55240 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh5O55240 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh5O55240 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh5O55240 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Rdh5O55240 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rdh5O55240 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rdh5O55240 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.12■□□□□ 0.97
Rdh5O55240 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rdh5O55240 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rdh5O55240 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rdh5O55240 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rdh5O55240 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.12■□□□□ 0.97
Rdh5O55240 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh5O55240 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh5O55240 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh5O55240 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh5O55240 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh5O55240 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh5O55240 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.11■□□□□ 0.97
Rdh5O55240 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rdh5O55240 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Rdh5O55240 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rdh5O55240 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rdh5O55240 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rdh5O55240 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rdh5O55240 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rdh5O55240 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rdh5O55240 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rdh5O55240 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.1■□□□□ 0.97
Rdh5O55240 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rdh5O55240 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rdh5O55240 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rdh5O55240 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.09■□□□□ 0.97
Rdh5O55240 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rdh5O55240 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms