Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Kcnu1O54982 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Kcnu1O54982 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.04■■□□□ 1.44
Kcnu1O54982 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Kcnu1O54982 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Kcnu1O54982 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.04■■□□□ 1.44
Kcnu1O54982 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Kcnu1O54982 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Kcnu1O54982 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Kcnu1O54982 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.03■■□□□ 1.44
Kcnu1O54982 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Kcnu1O54982 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Kcnu1O54982 Gm11599-201ENSMUST00000118720 878 ntBASIC24.02■■□□□ 1.44
Kcnu1O54982 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Kcnu1O54982 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
Kcnu1O54982 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.01■■□□□ 1.43
Kcnu1O54982 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Kcnu1O54982 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Kcnu1O54982 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Kcnu1O54982 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Kcnu1O54982 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Kcnu1O54982 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Kcnu1O54982 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24■■□□□ 1.43
Kcnu1O54982 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC24■■□□□ 1.43
Kcnu1O54982 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.99■■□□□ 1.43
Kcnu1O54982 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.99■■□□□ 1.43
Kcnu1O54982 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.99■■□□□ 1.43
Kcnu1O54982 Gm45364-201ENSMUST00000210883 159 ntBASIC23.99■■□□□ 1.43
Kcnu1O54982 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Kcnu1O54982 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Kcnu1O54982 Mir3960-201ENSMUST00000198213 73 ntBASIC23.98■■□□□ 1.43
Kcnu1O54982 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Kcnu1O54982 Gm9812-201ENSMUST00000061934 968 ntBASIC23.98■■□□□ 1.43
Kcnu1O54982 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Kcnu1O54982 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Kcnu1O54982 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.96■■□□□ 1.43
Kcnu1O54982 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Kcnu1O54982 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Kcnu1O54982 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.96■■□□□ 1.43
Kcnu1O54982 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Kcnu1O54982 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Kcnu1O54982 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Kcnu1O54982 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Kcnu1O54982 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.94■■□□□ 1.42
Kcnu1O54982 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Kcnu1O54982 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Kcnu1O54982 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.94■■□□□ 1.42
Kcnu1O54982 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Kcnu1O54982 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Kcnu1O54982 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.93■■□□□ 1.42
Kcnu1O54982 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Kcnu1O54982 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.93■■□□□ 1.42
Kcnu1O54982 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Kcnu1O54982 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Kcnu1O54982 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.92■■□□□ 1.42
Kcnu1O54982 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.92■■□□□ 1.42
Kcnu1O54982 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Kcnu1O54982 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Kcnu1O54982 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Kcnu1O54982 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kcnu1O54982 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kcnu1O54982 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
Kcnu1O54982 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Kcnu1O54982 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kcnu1O54982 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Kcnu1O54982 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Kcnu1O54982 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Kcnu1O54982 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.89■■□□□ 1.41
Kcnu1O54982 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Kcnu1O54982 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Kcnu1O54982 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Kcnu1O54982 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Kcnu1O54982 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Kcnu1O54982 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Kcnu1O54982 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Kcnu1O54982 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Kcnu1O54982 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.88■■□□□ 1.41
Kcnu1O54982 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
Kcnu1O54982 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Kcnu1O54982 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Kcnu1O54982 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Kcnu1O54982 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Kcnu1O54982 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.87■■□□□ 1.41
Kcnu1O54982 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Kcnu1O54982 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.87■■□□□ 1.41
Kcnu1O54982 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Kcnu1O54982 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kcnu1O54982 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Kcnu1O54982 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.86■■□□□ 1.41
Kcnu1O54982 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kcnu1O54982 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kcnu1O54982 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Kcnu1O54982 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Kcnu1O54982 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kcnu1O54982 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kcnu1O54982 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kcnu1O54982 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Kcnu1O54982 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kcnu1O54982 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Kcnu1O54982 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms