Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Per2O54943 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Per2O54943 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Per2O54943 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.39■■□□□ 1.34
Per2O54943 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Per2O54943 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Per2O54943 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Per2O54943 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Per2O54943 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.39■■□□□ 1.33
Per2O54943 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Per2O54943 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.38■■□□□ 1.33
Per2O54943 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
Per2O54943 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.38■■□□□ 1.33
Per2O54943 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Per2O54943 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Per2O54943 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Per2O54943 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Per2O54943 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Per2O54943 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Per2O54943 Gm45364-201ENSMUST00000210883 159 ntBASIC23.36■■□□□ 1.33
Per2O54943 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.36■■□□□ 1.33
Per2O54943 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Per2O54943 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Per2O54943 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Per2O54943 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Per2O54943 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.35■■□□□ 1.33
Per2O54943 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.35■■□□□ 1.33
Per2O54943 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.34■■□□□ 1.33
Per2O54943 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Per2O54943 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Per2O54943 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Per2O54943 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Per2O54943 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Per2O54943 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Per2O54943 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Per2O54943 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Per2O54943 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Per2O54943 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Per2O54943 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.32■■□□□ 1.32
Per2O54943 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.32■■□□□ 1.32
Per2O54943 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Per2O54943 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Per2O54943 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Per2O54943 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Per2O54943 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Per2O54943 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Per2O54943 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Per2O54943 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.3■■□□□ 1.32
Per2O54943 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Per2O54943 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Per2O54943 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Per2O54943 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Per2O54943 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Per2O54943 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Per2O54943 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Per2O54943 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Per2O54943 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.28■■□□□ 1.32
Per2O54943 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Per2O54943 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Per2O54943 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Per2O54943 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.27■■□□□ 1.32
Per2O54943 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Per2O54943 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Per2O54943 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Per2O54943 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
Per2O54943 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Per2O54943 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Per2O54943 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.26■■□□□ 1.31
Per2O54943 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.26■■□□□ 1.31
Per2O54943 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.26■■□□□ 1.31
Per2O54943 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Per2O54943 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.25■■□□□ 1.31
Per2O54943 Terc-201ENSMUST00000082862 423 ntBASIC23.25■■□□□ 1.31
Per2O54943 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Per2O54943 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Per2O54943 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Per2O54943 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.24■■□□□ 1.31
Per2O54943 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
Per2O54943 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Per2O54943 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Per2O54943 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Per2O54943 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Per2O54943 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Per2O54943 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.23■■□□□ 1.31
Per2O54943 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Per2O54943 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.22■■□□□ 1.31
Per2O54943 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Per2O54943 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Per2O54943 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Per2O54943 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Per2O54943 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Per2O54943 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Per2O54943 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Per2O54943 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.2■■□□□ 1.3
Per2O54943 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Per2O54943 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Per2O54943 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Per2O54943 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Per2O54943 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Per2O54943 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms