Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Per2O54943 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Per2O54943 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Per2O54943 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.39■■□□□ 1.34
Per2O54943 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Per2O54943 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Per2O54943 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Per2O54943 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Per2O54943 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.39■■□□□ 1.33
Per2O54943 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Per2O54943 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.38■■□□□ 1.33
Per2O54943 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
Per2O54943 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.38■■□□□ 1.33
Per2O54943 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Per2O54943 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Per2O54943 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Per2O54943 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Per2O54943 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Per2O54943 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Per2O54943 Gm45364-201ENSMUST00000210883 159 ntBASIC23.36■■□□□ 1.33
Per2O54943 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.36■■□□□ 1.33
Per2O54943 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Per2O54943 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Per2O54943 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Per2O54943 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Per2O54943 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.35■■□□□ 1.33
Per2O54943 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.35■■□□□ 1.33
Per2O54943 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.34■■□□□ 1.33
Per2O54943 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Per2O54943 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Per2O54943 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Per2O54943 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Per2O54943 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Per2O54943 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Per2O54943 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Per2O54943 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Per2O54943 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Per2O54943 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Per2O54943 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.32■■□□□ 1.32
Per2O54943 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.32■■□□□ 1.32
Per2O54943 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Per2O54943 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Per2O54943 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Per2O54943 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Per2O54943 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Per2O54943 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Per2O54943 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Per2O54943 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.3■■□□□ 1.32
Per2O54943 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Per2O54943 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Per2O54943 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Per2O54943 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Per2O54943 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Per2O54943 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Per2O54943 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Per2O54943 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Per2O54943 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.28■■□□□ 1.32
Per2O54943 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Per2O54943 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Per2O54943 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Per2O54943 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.27■■□□□ 1.32
Per2O54943 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Per2O54943 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Per2O54943 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Per2O54943 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
Per2O54943 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Per2O54943 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Per2O54943 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.26■■□□□ 1.31
Per2O54943 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.26■■□□□ 1.31
Per2O54943 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.26■■□□□ 1.31
Per2O54943 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Per2O54943 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.25■■□□□ 1.31
Per2O54943 Terc-201ENSMUST00000082862 423 ntBASIC23.25■■□□□ 1.31
Per2O54943 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Per2O54943 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Per2O54943 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Per2O54943 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.24■■□□□ 1.31
Per2O54943 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
Per2O54943 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Per2O54943 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Per2O54943 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Per2O54943 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Per2O54943 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Per2O54943 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.23■■□□□ 1.31
Per2O54943 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Per2O54943 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.22■■□□□ 1.31
Per2O54943 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Per2O54943 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Per2O54943 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Per2O54943 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Per2O54943 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Per2O54943 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Per2O54943 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Per2O54943 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.2■■□□□ 1.3
Per2O54943 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Per2O54943 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Per2O54943 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Per2O54943 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Per2O54943 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Per2O54943 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms