Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Abca4O35600 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Abca4O35600 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Abca4O35600 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Abca4O35600 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.08■■□□□ 1.13
Abca4O35600 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Abca4O35600 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Abca4O35600 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.08■■□□□ 1.12
Abca4O35600 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Abca4O35600 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Abca4O35600 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Abca4O35600 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Abca4O35600 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Abca4O35600 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.06■■□□□ 1.12
Abca4O35600 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Abca4O35600 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.06■■□□□ 1.12
Abca4O35600 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.06■■□□□ 1.12
Abca4O35600 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.05■■□□□ 1.12
Abca4O35600 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Abca4O35600 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.04■■□□□ 1.12
Abca4O35600 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Abca4O35600 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Abca4O35600 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Abca4O35600 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Abca4O35600 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Abca4O35600 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Abca4O35600 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Abca4O35600 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
Abca4O35600 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Abca4O35600 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Abca4O35600 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.01■■□□□ 1.11
Abca4O35600 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Abca4O35600 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Abca4O35600 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22■■□□□ 1.11
Abca4O35600 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22■■□□□ 1.11
Abca4O35600 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Abca4O35600 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Abca4O35600 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Abca4O35600 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Abca4O35600 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Abca4O35600 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Abca4O35600 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Abca4O35600 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.97■■□□□ 1.11
Abca4O35600 Gm12922-201ENSMUST00000120626 809 ntBASIC21.97■■□□□ 1.11
Abca4O35600 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Abca4O35600 Gm29257-201ENSMUST00000186115 639 ntBASIC21.97■■□□□ 1.11
Abca4O35600 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Abca4O35600 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Abca4O35600 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Abca4O35600 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Abca4O35600 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.96■■□□□ 1.11
Abca4O35600 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Abca4O35600 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Abca4O35600 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Abca4O35600 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Abca4O35600 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Abca4O35600 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Abca4O35600 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Abca4O35600 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.95■■□□□ 1.1
Abca4O35600 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Abca4O35600 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Abca4O35600 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.95■■□□□ 1.1
Abca4O35600 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Abca4O35600 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Abca4O35600 Gm7417-201ENSMUST00000192950 473 ntBASIC21.94■■□□□ 1.1
Abca4O35600 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Abca4O35600 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Abca4O35600 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Abca4O35600 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Abca4O35600 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Abca4O35600 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.93■■□□□ 1.1
Abca4O35600 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Abca4O35600 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Abca4O35600 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Abca4O35600 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Abca4O35600 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Abca4O35600 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Abca4O35600 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Abca4O35600 Gm27454-201ENSMUST00000185090 204 ntBASIC21.9■■□□□ 1.1
Abca4O35600 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Abca4O35600 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Abca4O35600 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Abca4O35600 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Abca4O35600 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Abca4O35600 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.89■■□□□ 1.09
Abca4O35600 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Abca4O35600 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Abca4O35600 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Abca4O35600 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Abca4O35600 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Abca4O35600 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Abca4O35600 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Abca4O35600 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.86■■□□□ 1.09
Abca4O35600 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.85■■□□□ 1.09
Abca4O35600 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Abca4O35600 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Abca4O35600 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Abca4O35600 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Abca4O35600 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Abca4O35600 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms