Protein–RNA interactions for Protein: O35445

Rnf5, E3 ubiquitin-protein ligase RNF5, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf5O35445 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rnf5O35445 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.89■□□□□ 0.46
Rnf5O35445 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rnf5O35445 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf5O35445 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf5O35445 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf5O35445 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf5O35445 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.88■□□□□ 0.45
Rnf5O35445 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.88■□□□□ 0.45
Rnf5O35445 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.88■□□□□ 0.45
Rnf5O35445 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf5O35445 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf5O35445 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rnf5O35445 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf5O35445 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf5O35445 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.87■□□□□ 0.45
Rnf5O35445 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf5O35445 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf5O35445 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.87■□□□□ 0.45
Rnf5O35445 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf5O35445 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf5O35445 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf5O35445 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf5O35445 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf5O35445 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf5O35445 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
Rnf5O35445 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf5O35445 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf5O35445 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf5O35445 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.85■□□□□ 0.45
Rnf5O35445 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf5O35445 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf5O35445 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf5O35445 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf5O35445 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf5O35445 Gm45364-201ENSMUST00000210883 159 ntBASIC17.84■□□□□ 0.45
Rnf5O35445 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.84■□□□□ 0.45
Rnf5O35445 Terc-201ENSMUST00000082862 423 ntBASIC17.84■□□□□ 0.45
Rnf5O35445 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf5O35445 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf5O35445 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf5O35445 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf5O35445 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf5O35445 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf5O35445 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf5O35445 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf5O35445 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf5O35445 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf5O35445 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf5O35445 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf5O35445 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf5O35445 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.81■□□□□ 0.44
Rnf5O35445 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf5O35445 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rnf5O35445 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rnf5O35445 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rnf5O35445 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf5O35445 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rnf5O35445 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.8■□□□□ 0.44
Rnf5O35445 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf5O35445 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf5O35445 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf5O35445 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.79■□□□□ 0.44
Rnf5O35445 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf5O35445 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf5O35445 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.79■□□□□ 0.44
Rnf5O35445 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rnf5O35445 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf5O35445 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Rnf5O35445 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.78■□□□□ 0.44
Rnf5O35445 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf5O35445 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf5O35445 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.78■□□□□ 0.44
Rnf5O35445 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf5O35445 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Rnf5O35445 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rnf5O35445 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf5O35445 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf5O35445 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf5O35445 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rnf5O35445 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Rnf5O35445 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf5O35445 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Rnf5O35445 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf5O35445 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.77■□□□□ 0.43
Rnf5O35445 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf5O35445 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.76■□□□□ 0.43
Rnf5O35445 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.76■□□□□ 0.43
Rnf5O35445 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf5O35445 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf5O35445 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf5O35445 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf5O35445 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf5O35445 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf5O35445 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf5O35445 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.75■□□□□ 0.43
Rnf5O35445 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf5O35445 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf5O35445 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf5O35445 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms