Protein–RNA interactions for Protein: O35280

Chek1, Serine/threonine-protein kinase Chk1, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chek1O35280 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Chek1O35280 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Chek1O35280 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chek1O35280 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chek1O35280 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chek1O35280 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Chek1O35280 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chek1O35280 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.36■□□□□ 0.53
Chek1O35280 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chek1O35280 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chek1O35280 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chek1O35280 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chek1O35280 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chek1O35280 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chek1O35280 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chek1O35280 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chek1O35280 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chek1O35280 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chek1O35280 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chek1O35280 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chek1O35280 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chek1O35280 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.34■□□□□ 0.53
Chek1O35280 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chek1O35280 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chek1O35280 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chek1O35280 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chek1O35280 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chek1O35280 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Chek1O35280 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chek1O35280 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chek1O35280 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chek1O35280 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chek1O35280 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.32■□□□□ 0.52
Chek1O35280 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chek1O35280 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chek1O35280 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Chek1O35280 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chek1O35280 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chek1O35280 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chek1O35280 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chek1O35280 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chek1O35280 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Chek1O35280 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chek1O35280 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chek1O35280 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chek1O35280 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chek1O35280 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chek1O35280 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chek1O35280 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chek1O35280 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.3■□□□□ 0.52
Chek1O35280 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chek1O35280 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chek1O35280 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chek1O35280 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chek1O35280 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chek1O35280 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chek1O35280 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Chek1O35280 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chek1O35280 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Chek1O35280 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chek1O35280 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chek1O35280 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chek1O35280 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.28■□□□□ 0.52
Chek1O35280 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chek1O35280 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chek1O35280 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Chek1O35280 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.27■□□□□ 0.52
Chek1O35280 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chek1O35280 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Chek1O35280 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chek1O35280 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.26■□□□□ 0.51
Chek1O35280 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chek1O35280 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chek1O35280 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Chek1O35280 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chek1O35280 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Chek1O35280 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chek1O35280 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chek1O35280 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Chek1O35280 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chek1O35280 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Chek1O35280 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chek1O35280 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chek1O35280 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chek1O35280 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chek1O35280 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chek1O35280 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chek1O35280 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Chek1O35280 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Chek1O35280 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chek1O35280 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.24■□□□□ 0.51
Chek1O35280 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chek1O35280 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chek1O35280 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Chek1O35280 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chek1O35280 Gm24804-201ENSMUST00000174982 85 ntBASIC18.23■□□□□ 0.51
Chek1O35280 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chek1O35280 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chek1O35280 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chek1O35280 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms