Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.81■□□□□ 0.76
Trav13d-3J3QMG8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.81■□□□□ 0.76
Trav13d-3J3QMG8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trav13d-3J3QMG8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.81■□□□□ 0.76
Trav13d-3J3QMG8 Gm6311-201ENSMUST00000073790 878 ntBASIC19.81■□□□□ 0.76
Trav13d-3J3QMG8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav13d-3J3QMG8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav13d-3J3QMG8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.8■□□□□ 0.76
Trav13d-3J3QMG8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav13d-3J3QMG8 Terc-201ENSMUST00000082862 423 ntBASIC19.8■□□□□ 0.76
Trav13d-3J3QMG8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.8■□□□□ 0.76
Trav13d-3J3QMG8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav13d-3J3QMG8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav13d-3J3QMG8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav13d-3J3QMG8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav13d-3J3QMG8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav13d-3J3QMG8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav13d-3J3QMG8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav13d-3J3QMG8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav13d-3J3QMG8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Trav13d-3J3QMG8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.78■□□□□ 0.76
Trav13d-3J3QMG8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav13d-3J3QMG8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav13d-3J3QMG8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav13d-3J3QMG8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav13d-3J3QMG8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Trav13d-3J3QMG8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav13d-3J3QMG8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav13d-3J3QMG8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav13d-3J3QMG8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav13d-3J3QMG8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav13d-3J3QMG8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav13d-3J3QMG8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trav13d-3J3QMG8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.76■□□□□ 0.75
Trav13d-3J3QMG8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav13d-3J3QMG8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav13d-3J3QMG8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav13d-3J3QMG8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav13d-3J3QMG8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.75■□□□□ 0.75
Trav13d-3J3QMG8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav13d-3J3QMG8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.75■□□□□ 0.75
Trav13d-3J3QMG8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Trav13d-3J3QMG8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav13d-3J3QMG8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.74■□□□□ 0.75
Trav13d-3J3QMG8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav13d-3J3QMG8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav13d-3J3QMG8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav13d-3J3QMG8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trav13d-3J3QMG8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav13d-3J3QMG8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trav13d-3J3QMG8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav13d-3J3QMG8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav13d-3J3QMG8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav13d-3J3QMG8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav13d-3J3QMG8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav13d-3J3QMG8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav13d-3J3QMG8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav13d-3J3QMG8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav13d-3J3QMG8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav13d-3J3QMG8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.71■□□□□ 0.75
Trav13d-3J3QMG8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav13d-3J3QMG8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav13d-3J3QMG8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav13d-3J3QMG8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav13d-3J3QMG8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav13d-3J3QMG8 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.7■□□□□ 0.74
Trav13d-3J3QMG8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav13d-3J3QMG8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav13d-3J3QMG8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav13d-3J3QMG8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trav13d-3J3QMG8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav13d-3J3QMG8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav13d-3J3QMG8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav13d-3J3QMG8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav13d-3J3QMG8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav13d-3J3QMG8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.69■□□□□ 0.74
Trav13d-3J3QMG8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav13d-3J3QMG8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav13d-3J3QMG8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav13d-3J3QMG8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav13d-3J3QMG8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav13d-3J3QMG8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.68■□□□□ 0.74
Trav13d-3J3QMG8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav13d-3J3QMG8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav13d-3J3QMG8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav13d-3J3QMG8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.68■□□□□ 0.74
Trav13d-3J3QMG8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
Trav13d-3J3QMG8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.67■□□□□ 0.74
Trav13d-3J3QMG8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav13d-3J3QMG8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav13d-3J3QMG8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.67■□□□□ 0.74
Trav13d-3J3QMG8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trav13d-3J3QMG8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav13d-3J3QMG8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav13d-3J3QMG8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav13d-3J3QMG8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav13d-3J3QMG8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Trav13d-3J3QMG8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.66■□□□□ 0.74
Trav13d-3J3QMG8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav13d-3J3QMG8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms