Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC25.35■■□□□ 1.65
Cntnap3E9PY62 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cntnap3E9PY62 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cntnap3E9PY62 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.34■■□□□ 1.65
Cntnap3E9PY62 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cntnap3E9PY62 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Cntnap3E9PY62 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cntnap3E9PY62 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cntnap3E9PY62 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cntnap3E9PY62 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cntnap3E9PY62 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cntnap3E9PY62 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cntnap3E9PY62 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.32■■□□□ 1.64
Cntnap3E9PY62 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.32■■□□□ 1.64
Cntnap3E9PY62 Gm10232-201ENSMUST00000089221 720 ntBASIC25.32■■□□□ 1.64
Cntnap3E9PY62 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Cntnap3E9PY62 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Cntnap3E9PY62 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cntnap3E9PY62 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cntnap3E9PY62 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.31■■□□□ 1.64
Cntnap3E9PY62 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cntnap3E9PY62 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cntnap3E9PY62 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cntnap3E9PY62 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Cntnap3E9PY62 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC25.3■■□□□ 1.64
Cntnap3E9PY62 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cntnap3E9PY62 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cntnap3E9PY62 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cntnap3E9PY62 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
Cntnap3E9PY62 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cntnap3E9PY62 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Cntnap3E9PY62 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cntnap3E9PY62 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Cntnap3E9PY62 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Cntnap3E9PY62 Zxda-201ENSMUST00000117281 2621 ntBASIC25.28■■□□□ 1.64
Cntnap3E9PY62 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.28■■□□□ 1.64
Cntnap3E9PY62 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Cntnap3E9PY62 Gm9847-201ENSMUST00000052528 599 ntBASIC25.28■■□□□ 1.64
Cntnap3E9PY62 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Cntnap3E9PY62 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Cntnap3E9PY62 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Cntnap3E9PY62 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Cntnap3E9PY62 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.26■■□□□ 1.63
Cntnap3E9PY62 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cntnap3E9PY62 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cntnap3E9PY62 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cntnap3E9PY62 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cntnap3E9PY62 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cntnap3E9PY62 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Cntnap3E9PY62 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC25.25■■□□□ 1.63
Cntnap3E9PY62 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cntnap3E9PY62 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.25■■□□□ 1.63
Cntnap3E9PY62 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Cntnap3E9PY62 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Cntnap3E9PY62 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cntnap3E9PY62 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cntnap3E9PY62 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.23■■□□□ 1.63
Cntnap3E9PY62 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cntnap3E9PY62 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cntnap3E9PY62 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Cntnap3E9PY62 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Cntnap3E9PY62 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC25.22■■□□□ 1.63
Cntnap3E9PY62 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cntnap3E9PY62 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.22■■□□□ 1.63
Cntnap3E9PY62 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Cntnap3E9PY62 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Cntnap3E9PY62 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cntnap3E9PY62 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.21■■□□□ 1.63
Cntnap3E9PY62 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Cntnap3E9PY62 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Cntnap3E9PY62 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cntnap3E9PY62 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cntnap3E9PY62 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cntnap3E9PY62 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Cntnap3E9PY62 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.19■■□□□ 1.62
Cntnap3E9PY62 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Cntnap3E9PY62 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cntnap3E9PY62 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cntnap3E9PY62 Flvcr1-202ENSMUST00000191946 1216 ntBASIC25.18■■□□□ 1.62
Cntnap3E9PY62 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.18■■□□□ 1.62
Cntnap3E9PY62 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Cntnap3E9PY62 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cntnap3E9PY62 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cntnap3E9PY62 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cntnap3E9PY62 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Cntnap3E9PY62 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Cntnap3E9PY62 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Cntnap3E9PY62 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC25.16■■□□□ 1.62
Cntnap3E9PY62 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC25.15■■□□□ 1.62
Cntnap3E9PY62 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cntnap3E9PY62 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Cntnap3E9PY62 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Cntnap3E9PY62 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cntnap3E9PY62 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Cntnap3E9PY62 Gm7417-201ENSMUST00000192950 473 ntBASIC25.12■■□□□ 1.61
Cntnap3E9PY62 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cntnap3E9PY62 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.12■■□□□ 1.61
Cntnap3E9PY62 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.12■■□□□ 1.61
Cntnap3E9PY62 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cntnap3E9PY62 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms