Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trav13d-4A0A0G2JFX3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13d-4A0A0G2JFX3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13d-4A0A0G2JFX3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.35■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Nkain2-201ENSMUST00000092602 558 ntBASIC15.34■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13d-4A0A0G2JFX3 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.33■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav13d-4A0A0G2JFX3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-4A0A0G2JFX3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-4A0A0G2JFX3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav13d-4A0A0G2JFX3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.31■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms