Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.28■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.27■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav9n-2A0A0G2JDP3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.26■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Trav9n-2A0A0G2JDP3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Mir3960-201ENSMUST00000198213 73 ntBASIC16.25■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9n-2A0A0G2JDP3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav9n-2A0A0G2JDP3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trav9n-2A0A0G2JDP3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.23■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav9n-2A0A0G2JDP3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.23■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9n-2A0A0G2JDP3 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.21■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.21■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Trav9n-2A0A0G2JDP3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.2■□□□□ 0.18
Trav9n-2A0A0G2JDP3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.2■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Gm45364-201ENSMUST00000210883 159 ntBASIC16.19■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9n-2A0A0G2JDP3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.18■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.17■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.17■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9n-2A0A0G2JDP3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.16■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Gm9812-201ENSMUST00000061934 968 ntBASIC16.15■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9n-2A0A0G2JDP3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.14■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.14■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9n-2A0A0G2JDP3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms