Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv19A0A0B4J1H4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv19A0A0B4J1H4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv19A0A0B4J1H4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv19A0A0B4J1H4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv19A0A0B4J1H4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv19A0A0B4J1H4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
Trbv19A0A0B4J1H4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trbv19A0A0B4J1H4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18■□□□□ 0.47
Trbv19A0A0B4J1H4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv19A0A0B4J1H4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv19A0A0B4J1H4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv19A0A0B4J1H4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv19A0A0B4J1H4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trbv19A0A0B4J1H4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.98■□□□□ 0.47
Trbv19A0A0B4J1H4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv19A0A0B4J1H4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv19A0A0B4J1H4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trbv19A0A0B4J1H4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.97■□□□□ 0.47
Trbv19A0A0B4J1H4 Gm4799-201ENSMUST00000095396 657 ntBASIC17.97■□□□□ 0.47
Trbv19A0A0B4J1H4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv19A0A0B4J1H4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv19A0A0B4J1H4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv19A0A0B4J1H4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv19A0A0B4J1H4 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.96■□□□□ 0.47
Trbv19A0A0B4J1H4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv19A0A0B4J1H4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.96■□□□□ 0.47
Trbv19A0A0B4J1H4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv19A0A0B4J1H4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv19A0A0B4J1H4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv19A0A0B4J1H4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv19A0A0B4J1H4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv19A0A0B4J1H4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Trbv19A0A0B4J1H4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv19A0A0B4J1H4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv19A0A0B4J1H4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.94■□□□□ 0.46
Trbv19A0A0B4J1H4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv19A0A0B4J1H4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.94■□□□□ 0.46
Trbv19A0A0B4J1H4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv19A0A0B4J1H4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv19A0A0B4J1H4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv19A0A0B4J1H4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv19A0A0B4J1H4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv19A0A0B4J1H4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.92■□□□□ 0.46
Trbv19A0A0B4J1H4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trbv19A0A0B4J1H4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv19A0A0B4J1H4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trbv19A0A0B4J1H4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.92■□□□□ 0.46
Trbv19A0A0B4J1H4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.92■□□□□ 0.46
Trbv19A0A0B4J1H4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trbv19A0A0B4J1H4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv19A0A0B4J1H4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv19A0A0B4J1H4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv19A0A0B4J1H4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trbv19A0A0B4J1H4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv19A0A0B4J1H4 Gm7432-201ENSMUST00000210343 879 ntBASIC17.91■□□□□ 0.46
Trbv19A0A0B4J1H4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv19A0A0B4J1H4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv19A0A0B4J1H4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv19A0A0B4J1H4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv19A0A0B4J1H4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv19A0A0B4J1H4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv19A0A0B4J1H4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv19A0A0B4J1H4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv19A0A0B4J1H4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.9■□□□□ 0.46
Trbv19A0A0B4J1H4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.9■□□□□ 0.46
Trbv19A0A0B4J1H4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.9■□□□□ 0.46
Trbv19A0A0B4J1H4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trbv19A0A0B4J1H4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv19A0A0B4J1H4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv19A0A0B4J1H4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv19A0A0B4J1H4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv19A0A0B4J1H4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trbv19A0A0B4J1H4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv19A0A0B4J1H4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv19A0A0B4J1H4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv19A0A0B4J1H4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv19A0A0B4J1H4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv19A0A0B4J1H4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trbv19A0A0B4J1H4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv19A0A0B4J1H4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv19A0A0B4J1H4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv19A0A0B4J1H4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv19A0A0B4J1H4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trbv19A0A0B4J1H4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv19A0A0B4J1H4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv19A0A0B4J1H4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv19A0A0B4J1H4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trbv19A0A0B4J1H4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trbv19A0A0B4J1H4 Gm9812-201ENSMUST00000061934 968 ntBASIC17.86■□□□□ 0.45
Trbv19A0A0B4J1H4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trbv19A0A0B4J1H4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv19A0A0B4J1H4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv19A0A0B4J1H4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.86■□□□□ 0.45
Trbv19A0A0B4J1H4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv19A0A0B4J1H4 Mir3960-201ENSMUST00000198213 73 ntBASIC17.85■□□□□ 0.45
Trbv19A0A0B4J1H4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trbv19A0A0B4J1H4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv19A0A0B4J1H4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv19A0A0B4J1H4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms