Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv5A0A0B4J1G9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trbv5A0A0B4J1G9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trbv5A0A0B4J1G9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv5A0A0B4J1G9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv5A0A0B4J1G9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trbv5A0A0B4J1G9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.12■□□□□ 0.49
Trbv5A0A0B4J1G9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv5A0A0B4J1G9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv5A0A0B4J1G9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trbv5A0A0B4J1G9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Trbv5A0A0B4J1G9 Gm24804-201ENSMUST00000174982 85 ntBASIC18.11■□□□□ 0.49
Trbv5A0A0B4J1G9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv5A0A0B4J1G9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trbv5A0A0B4J1G9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv5A0A0B4J1G9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv5A0A0B4J1G9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trbv5A0A0B4J1G9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv5A0A0B4J1G9 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.1■□□□□ 0.49
Trbv5A0A0B4J1G9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv5A0A0B4J1G9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv5A0A0B4J1G9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv5A0A0B4J1G9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Trbv5A0A0B4J1G9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trbv5A0A0B4J1G9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv5A0A0B4J1G9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv5A0A0B4J1G9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv5A0A0B4J1G9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.09■□□□□ 0.49
Trbv5A0A0B4J1G9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv5A0A0B4J1G9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv5A0A0B4J1G9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv5A0A0B4J1G9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv5A0A0B4J1G9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv5A0A0B4J1G9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.08■□□□□ 0.49
Trbv5A0A0B4J1G9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv5A0A0B4J1G9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Trbv5A0A0B4J1G9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.08■□□□□ 0.48
Trbv5A0A0B4J1G9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv5A0A0B4J1G9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv5A0A0B4J1G9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv5A0A0B4J1G9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv5A0A0B4J1G9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv5A0A0B4J1G9 Gm16148-201ENSMUST00000119653 893 ntBASIC18.07■□□□□ 0.48
Trbv5A0A0B4J1G9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv5A0A0B4J1G9 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.07■□□□□ 0.48
Trbv5A0A0B4J1G9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv5A0A0B4J1G9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trbv5A0A0B4J1G9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv5A0A0B4J1G9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv5A0A0B4J1G9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv5A0A0B4J1G9 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.06■□□□□ 0.48
Trbv5A0A0B4J1G9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trbv5A0A0B4J1G9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv5A0A0B4J1G9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv5A0A0B4J1G9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.06■□□□□ 0.48
Trbv5A0A0B4J1G9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv5A0A0B4J1G9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.05■□□□□ 0.48
Trbv5A0A0B4J1G9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv5A0A0B4J1G9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv5A0A0B4J1G9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.05■□□□□ 0.48
Trbv5A0A0B4J1G9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv5A0A0B4J1G9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv5A0A0B4J1G9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv5A0A0B4J1G9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv5A0A0B4J1G9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.04■□□□□ 0.48
Trbv5A0A0B4J1G9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv5A0A0B4J1G9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv5A0A0B4J1G9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trbv5A0A0B4J1G9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv5A0A0B4J1G9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv5A0A0B4J1G9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv5A0A0B4J1G9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trbv5A0A0B4J1G9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv5A0A0B4J1G9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv5A0A0B4J1G9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.02■□□□□ 0.48
Trbv5A0A0B4J1G9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trbv5A0A0B4J1G9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Trbv5A0A0B4J1G9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv5A0A0B4J1G9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv5A0A0B4J1G9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv5A0A0B4J1G9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trbv5A0A0B4J1G9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Trbv5A0A0B4J1G9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv5A0A0B4J1G9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv5A0A0B4J1G9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv5A0A0B4J1G9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv5A0A0B4J1G9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv5A0A0B4J1G9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trbv5A0A0B4J1G9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trbv5A0A0B4J1G9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trbv5A0A0B4J1G9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trbv5A0A0B4J1G9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv5A0A0B4J1G9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv5A0A0B4J1G9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv5A0A0B4J1G9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv5A0A0B4J1G9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.99■□□□□ 0.47
Trbv5A0A0B4J1G9 Gm30023-201ENSMUST00000197970 889 ntBASIC17.99■□□□□ 0.47
Trbv5A0A0B4J1G9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv5A0A0B4J1G9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv5A0A0B4J1G9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms