Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.1■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.09■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-52A0A0A6YXC3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-52A0A0A6YXC3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-52A0A0A6YXC3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.05■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Gm11175-201ENSMUST00000116172 543 ntBASIC17.05■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.05■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.04■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Mir6538-201ENSMUST00000183713 110 ntBASIC17.04■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-52A0A0A6YXC3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.03■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.03■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-52A0A0A6YXC3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-52A0A0A6YXC3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ighv1-52A0A0A6YXC3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.01■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Gm44428-201ENSMUST00000204474 874 ntBASIC16.99■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-52A0A0A6YXC3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.99■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.98■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-52A0A0A6YXC3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.97■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-52A0A0A6YXC3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.97■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.96■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-52A0A0A6YXC3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms