Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13-2A0A075B649 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav13-2A0A075B649 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13-2A0A075B649 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13-2A0A075B649 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Trav13-2A0A075B649 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav13-2A0A075B649 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13-2A0A075B649 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13-2A0A075B649 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav13-2A0A075B649 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav13-2A0A075B649 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13-2A0A075B649 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13-2A0A075B649 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav13-2A0A075B649 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13-2A0A075B649 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13-2A0A075B649 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-2A0A075B649 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-2A0A075B649 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav13-2A0A075B649 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-2A0A075B649 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav13-2A0A075B649 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-2A0A075B649 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-2A0A075B649 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trav13-2A0A075B649 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-2A0A075B649 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav13-2A0A075B649 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13-2A0A075B649 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Trav13-2A0A075B649 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav13-2A0A075B649 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13-2A0A075B649 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC15□□□□□ -0.01
Trav13-2A0A075B649 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13-2A0A075B649 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13-2A0A075B649 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13-2A0A075B649 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13-2A0A075B649 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13-2A0A075B649 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13-2A0A075B649 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13-2A0A075B649 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav13-2A0A075B649 Tdp2-203ENSMUST00000223804 1136 ntBASIC14.99□□□□□ -0.01
Trav13-2A0A075B649 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13-2A0A075B649 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav13-2A0A075B649 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav13-2A0A075B649 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13-2A0A075B649 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13-2A0A075B649 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13-2A0A075B649 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13-2A0A075B649 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13-2A0A075B649 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav13-2A0A075B649 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13-2A0A075B649 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13-2A0A075B649 Gm42699-201ENSMUST00000198104 1657 ntBASIC14.98□□□□□ -0.01
Trav13-2A0A075B649 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13-2A0A075B649 Gm45855-201ENSMUST00000212546 880 ntBASIC14.98□□□□□ -0.01
Trav13-2A0A075B649 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav13-2A0A075B649 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13-2A0A075B649 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav13-2A0A075B649 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13-2A0A075B649 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav13-2A0A075B649 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav13-2A0A075B649 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav13-2A0A075B649 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav13-2A0A075B649 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13-2A0A075B649 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13-2A0A075B649 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav13-2A0A075B649 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-2A0A075B649 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-2A0A075B649 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-2A0A075B649 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-2A0A075B649 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC14.96□□□□□ -0.01
Trav13-2A0A075B649 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-2A0A075B649 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-2A0A075B649 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-2A0A075B649 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav13-2A0A075B649 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-2A0A075B649 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-2A0A075B649 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-2A0A075B649 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-2A0A075B649 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-2A0A075B649 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav13-2A0A075B649 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-2A0A075B649 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav13-2A0A075B649 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-2A0A075B649 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-2A0A075B649 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-2A0A075B649 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-2A0A075B649 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-2A0A075B649 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms