Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.93■□□□□ 0.78
Trav6-7-dv9A0A075B639 Gm9812-201ENSMUST00000061934 968 ntBASIC19.93■□□□□ 0.78
Trav6-7-dv9A0A075B639 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav6-7-dv9A0A075B639 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav6-7-dv9A0A075B639 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
Trav6-7-dv9A0A075B639 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trav6-7-dv9A0A075B639 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trav6-7-dv9A0A075B639 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trav6-7-dv9A0A075B639 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Trav6-7-dv9A0A075B639 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav6-7-dv9A0A075B639 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav6-7-dv9A0A075B639 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.91■□□□□ 0.78
Trav6-7-dv9A0A075B639 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav6-7-dv9A0A075B639 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6-7-dv9A0A075B639 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6-7-dv9A0A075B639 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6-7-dv9A0A075B639 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.9■□□□□ 0.78
Trav6-7-dv9A0A075B639 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6-7-dv9A0A075B639 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6-7-dv9A0A075B639 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav6-7-dv9A0A075B639 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.89■□□□□ 0.77
Trav6-7-dv9A0A075B639 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.89■□□□□ 0.77
Trav6-7-dv9A0A075B639 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav6-7-dv9A0A075B639 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav6-7-dv9A0A075B639 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav6-7-dv9A0A075B639 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.88■□□□□ 0.77
Trav6-7-dv9A0A075B639 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav6-7-dv9A0A075B639 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-7-dv9A0A075B639 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-7-dv9A0A075B639 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-7-dv9A0A075B639 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trav6-7-dv9A0A075B639 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trav6-7-dv9A0A075B639 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-7-dv9A0A075B639 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-7-dv9A0A075B639 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-7-dv9A0A075B639 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav6-7-dv9A0A075B639 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav6-7-dv9A0A075B639 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav6-7-dv9A0A075B639 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trav6-7-dv9A0A075B639 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav6-7-dv9A0A075B639 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trav6-7-dv9A0A075B639 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trav6-7-dv9A0A075B639 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav6-7-dv9A0A075B639 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav6-7-dv9A0A075B639 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6-7-dv9A0A075B639 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6-7-dv9A0A075B639 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6-7-dv9A0A075B639 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6-7-dv9A0A075B639 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.84■□□□□ 0.77
Trav6-7-dv9A0A075B639 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trav6-7-dv9A0A075B639 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.83■□□□□ 0.77
Trav6-7-dv9A0A075B639 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav6-7-dv9A0A075B639 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav6-7-dv9A0A075B639 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.83■□□□□ 0.76
Trav6-7-dv9A0A075B639 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav6-7-dv9A0A075B639 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.82■□□□□ 0.76
Trav6-7-dv9A0A075B639 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Trav6-7-dv9A0A075B639 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.82■□□□□ 0.76
Trav6-7-dv9A0A075B639 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6-7-dv9A0A075B639 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trav6-7-dv9A0A075B639 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6-7-dv9A0A075B639 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav6-7-dv9A0A075B639 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trav6-7-dv9A0A075B639 Gm45364-201ENSMUST00000210883 159 ntBASIC19.81■□□□□ 0.76
Trav6-7-dv9A0A075B639 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav6-7-dv9A0A075B639 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trav6-7-dv9A0A075B639 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6-7-dv9A0A075B639 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.8■□□□□ 0.76
Trav6-7-dv9A0A075B639 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6-7-dv9A0A075B639 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6-7-dv9A0A075B639 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6-7-dv9A0A075B639 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.79■□□□□ 0.76
Trav6-7-dv9A0A075B639 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.79■□□□□ 0.76
Trav6-7-dv9A0A075B639 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6-7-dv9A0A075B639 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav6-7-dv9A0A075B639 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Trav6-7-dv9A0A075B639 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav6-7-dv9A0A075B639 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav6-7-dv9A0A075B639 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.78■□□□□ 0.76
Trav6-7-dv9A0A075B639 Terc-201ENSMUST00000082862 423 ntBASIC19.78■□□□□ 0.76
Trav6-7-dv9A0A075B639 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav6-7-dv9A0A075B639 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav6-7-dv9A0A075B639 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Trav6-7-dv9A0A075B639 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trav6-7-dv9A0A075B639 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.77■□□□□ 0.76
Trav6-7-dv9A0A075B639 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-7-dv9A0A075B639 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-7-dv9A0A075B639 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-7-dv9A0A075B639 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trav6-7-dv9A0A075B639 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Trav6-7-dv9A0A075B639 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-7-dv9A0A075B639 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-7-dv9A0A075B639 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.76■□□□□ 0.75
Trav6-7-dv9A0A075B639 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trav6-7-dv9A0A075B639 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav6-7-dv9A0A075B639 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6-7-dv9A0A075B639 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6-7-dv9A0A075B639 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6-7-dv9A0A075B639 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav6-7-dv9A0A075B639 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms