Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Gm14859-201ENSMUST00000117752 357 ntBASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lsm1Q8VC85 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lsm1Q8VC85 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lsm1Q8VC85 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lsm1Q8VC85 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lsm1Q8VC85 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Gm27646-201ENSMUST00000183989 110 ntBASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Celf4-206ENSMUST00000224553 1729 ntBASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.58□□□□□ -0.08
Lsm1Q8VC85 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm1Q8VC85 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms