Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 AF186192.3-201ENST00000583427 947 ntBASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 MIR3180-5-201ENST00000583743 153 ntBASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 AC096733.2-201ENST00000609937 1394 ntBASIC15.75■□□□□ 0.11
LRRTM1Q86UE6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 AC073195.1-201ENST00000607241 877 ntBASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRRTM1Q86UE6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 ESRRAP1-201ENST00000400596 1257 ntBASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRTM1Q86UE6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRTM1Q86UE6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRTM1Q86UE6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRTM1Q86UE6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRTM1Q86UE6 FSCN1P1-201ENST00000568912 1481 ntBASIC15.72■□□□□ 0.11
LRRTM1Q86UE6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRTM1Q86UE6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRRTM1Q86UE6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
LRRTM1Q86UE6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRTM1Q86UE6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRTM1Q86UE6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRTM1Q86UE6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRRTM1Q86UE6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRTM1Q86UE6 AL138688.1-201ENST00000624851 1594 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms