Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC62Q6P9F0 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC62Q6P9F0 AC011467.2-201ENST00000598425 242 ntBASIC20.33■□□□□ 0.85
CCDC62Q6P9F0 BX640515.1-201ENST00000617215 977 ntBASIC20.33■□□□□ 0.85
CCDC62Q6P9F0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC62Q6P9F0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC62Q6P9F0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC62Q6P9F0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC62Q6P9F0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC62Q6P9F0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC62Q6P9F0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC62Q6P9F0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC62Q6P9F0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC62Q6P9F0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 AC064862.7-201ENST00000604520 867 ntBASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 AC008608.2-201ENST00000606089 416 ntBASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 AL355877.3-201ENST00000622820 899 ntBASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 AC148477.8-201ENST00000624298 468 ntBASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC62Q6P9F0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 KRT18P67-201ENST00000432816 1264 ntBASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 AL031598.1-201ENST00000561511 1773 ntBASIC20.31■□□□□ 0.84
CCDC62Q6P9F0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 FGFR3P6-201ENST00000457012 610 ntBASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 AP001005.1-201ENST00000571755 1248 ntBASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 AP001269.4-201ENST00000609611 512 ntBASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 AL773604.1-201ENST00000617417 272 ntBASIC20.3■□□□□ 0.84
CCDC62Q6P9F0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms