Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 KRT8P48-201ENST00000515599 1220 ntBASIC9.82□□□□□ -0.84
UBR4Q5T4S7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 PGM5P2-202ENST00000637225 1043 ntBASIC9.82□□□□□ -0.84
UBR4Q5T4S7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 SPDYE14P-201ENST00000442619 822 ntBASIC9.82□□□□□ -0.84
UBR4Q5T4S7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 AC122714.2-201ENST00000502787 707 ntBASIC9.82□□□□□ -0.84
UBR4Q5T4S7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 AC023141.13-201ENST00000604991 943 ntBASIC9.82□□□□□ -0.84
UBR4Q5T4S7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 AL357033.4-201ENST00000617703 1807 ntBASIC9.82□□□□□ -0.84
UBR4Q5T4S7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC9.82□□□□□ -0.84
UBR4Q5T4S7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 AC114501.2-201ENST00000439631 535 ntBASIC9.81□□□□□ -0.84
UBR4Q5T4S7 AC114501.1-201ENST00000445949 172 ntBASIC9.81□□□□□ -0.84
UBR4Q5T4S7 PRYP5-201ENST00000451909 266 ntBASIC9.81□□□□□ -0.84
UBR4Q5T4S7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 AL583810.1-201ENST00000553344 1045 ntBASIC9.81□□□□□ -0.84
UBR4Q5T4S7 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 AC004790.2-201ENST00000623588 572 ntBASIC9.81□□□□□ -0.84
UBR4Q5T4S7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
UBR4Q5T4S7 SIGLEC16-201ENST00000599858 1437 ntBASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms