Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Gm16026-204ENSMUST00000162652 683 ntBASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Mir7023-201ENSMUST00000185093 64 ntBASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-2Q5R1I4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-2Q5R1I4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-2Q5R1I4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-2Q5R1I4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-2Q5R1I4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-2Q5R1I4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-2Q5R1I4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav6-2Q5R1I4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-2Q5R1I4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-2Q5R1I4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-2Q5R1I4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-2Q5R1I4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-2Q5R1I4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-2Q5R1I4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-2Q5R1I4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms