Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cks1bP61025 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cks1bP61025 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cks1bP61025 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 AC154855.1-201ENSMUST00000227353 1458 ntBASIC10.87□□□□□ -0.67
Cks1bP61025 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cks1bP61025 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Mir1199-201ENSMUST00000117015 119 ntBASIC10.87□□□□□ -0.67
Cks1bP61025 Gm13181-201ENSMUST00000120117 1069 ntBASIC10.87□□□□□ -0.67
Cks1bP61025 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cks1bP61025 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC10.87□□□□□ -0.67
Cks1bP61025 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC10.87□□□□□ -0.67
Cks1bP61025 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Gm10698-201ENSMUST00000182663 604 ntBASIC10.87□□□□□ -0.67
Cks1bP61025 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC10.87□□□□□ -0.67
Cks1bP61025 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cks1bP61025 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.87□□□□□ -0.67
Cks1bP61025 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cks1bP61025 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cks1bP61025 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cks1bP61025 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cks1bP61025 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Gm12500-202ENSMUST00000186471 2428 ntBASIC10.87□□□□□ -0.67
Cks1bP61025 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cks1bP61025 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.87□□□□□ -0.67
Cks1bP61025 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC10.87□□□□□ -0.67
Cks1bP61025 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC10.87□□□□□ -0.67
Cks1bP61025 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cks1bP61025 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cks1bP61025 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Cks1bP61025 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cks1bP61025 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cks1bP61025 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cks1bP61025 Gm27463-201ENSMUST00000183569 57 ntBASIC10.86□□□□□ -0.67
Cks1bP61025 Gm16042-201ENSMUST00000204813 1247 ntBASIC10.86□□□□□ -0.67
Cks1bP61025 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Cks1bP61025 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.86□□□□□ -0.67
Cks1bP61025 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC10.86□□□□□ -0.67
Cks1bP61025 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cks1bP61025 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.85□□□□□ -0.67
Cks1bP61025 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cks1bP61025 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms