Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.39□□□□□ -0.27
Ccl3P10855 Gm25144-201ENSMUST00000179561 110 ntBASIC13.39□□□□□ -0.27
Ccl3P10855 Gm25352-201ENSMUST00000179815 110 ntBASIC13.39□□□□□ -0.27
Ccl3P10855 Mir7684-201ENSMUST00000183858 60 ntBASIC13.39□□□□□ -0.27
Ccl3P10855 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccl3P10855 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.39□□□□□ -0.27
Ccl3P10855 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ccl3P10855 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ccl3P10855 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ccl3P10855 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.39□□□□□ -0.27
Ccl3P10855 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccl3P10855 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ccl3P10855 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccl3P10855 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ccl3P10855 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.38□□□□□ -0.27
Ccl3P10855 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Ccl3P10855 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.38□□□□□ -0.27
Ccl3P10855 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Ccl3P10855 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Ccl3P10855 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Gm2423-201ENSMUST00000074863 733 ntBASIC13.38□□□□□ -0.27
Ccl3P10855 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl3P10855 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ccl3P10855 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Ccl3P10855 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Gm11424-201ENSMUST00000121929 829 ntBASIC13.37□□□□□ -0.27
Ccl3P10855 Gm28630-201ENSMUST00000187806 498 ntBASIC13.37□□□□□ -0.27
Ccl3P10855 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.37□□□□□ -0.27
Ccl3P10855 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccl3P10855 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ccl3P10855 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.37□□□□□ -0.27
Ccl3P10855 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ccl3P10855 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.37□□□□□ -0.27
Ccl3P10855 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccl3P10855 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl3P10855 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.36□□□□□ -0.27
Ccl3P10855 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ccl3P10855 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ccl3P10855 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Ccl3P10855 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.36□□□□□ -0.27
Ccl3P10855 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.36□□□□□ -0.27
Ccl3P10855 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl3P10855 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.36□□□□□ -0.27
Ccl3P10855 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.36□□□□□ -0.27
Ccl3P10855 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ccl3P10855 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ccl3P10855 Gm18766-201ENSMUST00000189811 808 ntBASIC13.36□□□□□ -0.27
Ccl3P10855 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms