Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
FOXN1O15353 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
FOXN1O15353 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
FOXN1O15353 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN1O15353 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN1O15353 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.6■■□□□ 1.05
FOXN1O15353 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN1O15353 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN1O15353 IRX1P1-201ENST00000438849 1838 ntBASIC21.6■■□□□ 1.05
FOXN1O15353 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
FOXN1O15353 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN1O15353 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.6■■□□□ 1.05
FOXN1O15353 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN1O15353 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
FOXN1O15353 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.6■■□□□ 1.05
FOXN1O15353 AC096582.2-201ENST00000510860 516 ntBASIC21.6■■□□□ 1.05
FOXN1O15353 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.6■■□□□ 1.05
FOXN1O15353 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.6■■□□□ 1.05
FOXN1O15353 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXN1O15353 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.6■■□□□ 1.05
FOXN1O15353 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC21.6■■□□□ 1.05
FOXN1O15353 AP002472.1-201ENST00000577490 586 ntBASIC21.6■■□□□ 1.05
FOXN1O15353 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.6■■□□□ 1.05
FOXN1O15353 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN1O15353 AL096865.1-201ENST00000606796 927 ntBASIC21.6■■□□□ 1.05
FOXN1O15353 AC114341.1-201ENST00000618070 349 ntBASIC21.6■■□□□ 1.05
FOXN1O15353 AL035252.4-201ENST00000624174 288 ntBASIC21.6■■□□□ 1.05
FOXN1O15353 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN1O15353 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
FOXN1O15353 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN1O15353 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN1O15353 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
FOXN1O15353 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
FOXN1O15353 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.6■■□□□ 1.05
FOXN1O15353 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN1O15353 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN1O15353 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
FOXN1O15353 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXN1O15353 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.6■■□□□ 1.05
FOXN1O15353 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
FOXN1O15353 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN1O15353 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN1O15353 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN1O15353 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN1O15353 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN1O15353 IGHGP-201ENST00000390555 1178 ntBASIC21.59■■□□□ 1.05
FOXN1O15353 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN1O15353 AC092474.2-201ENST00000424288 719 ntBASIC21.59■■□□□ 1.05
FOXN1O15353 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXN1O15353 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.59■■□□□ 1.05
FOXN1O15353 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN1O15353 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
FOXN1O15353 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXN1O15353 AC011840.4-201ENST00000578471 627 ntBASIC21.59■■□□□ 1.05
FOXN1O15353 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN1O15353 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXN1O15353 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN1O15353 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXN1O15353 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN1O15353 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN1O15353 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXN1O15353 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXN1O15353 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
FOXN1O15353 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
FOXN1O15353 HLA-J-201ENST00000462773 1622 ntBASIC21.58■■□□□ 1.05
FOXN1O15353 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN1O15353 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.58■■□□□ 1.05
FOXN1O15353 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
FOXN1O15353 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.58■■□□□ 1.05
FOXN1O15353 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN1O15353 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.58■■□□□ 1.05
FOXN1O15353 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN1O15353 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN1O15353 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN1O15353 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN1O15353 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN1O15353 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN1O15353 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.58■■□□□ 1.05
FOXN1O15353 AC005034.1-201ENST00000426657 489 ntBASIC21.58■■□□□ 1.05
FOXN1O15353 RPS2P1-201ENST00000434010 821 ntBASIC21.58■■□□□ 1.05
FOXN1O15353 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.58■■□□□ 1.05
FOXN1O15353 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.58■■□□□ 1.05
FOXN1O15353 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN1O15353 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.58■■□□□ 1.05
FOXN1O15353 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
FOXN1O15353 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.58■■□□□ 1.05
FOXN1O15353 AC012640.2-201ENST00000561606 901 ntBASIC21.58■■□□□ 1.05
FOXN1O15353 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.58■■□□□ 1.05
FOXN1O15353 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN1O15353 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN1O15353 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXN1O15353 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FOXN1O15353 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FOXN1O15353 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.58■■□□□ 1.04
FOXN1O15353 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
FOXN1O15353 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
FOXN1O15353 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
FOXN1O15353 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
FOXN1O15353 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
FOXN1O15353 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms