Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP2A1O14983 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP2A1O14983 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP2A1O14983 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A1O14983 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.71■□□□□ 0.91
ATP2A1O14983 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP2A1O14983 AL031598.1-201ENST00000561511 1773 ntBASIC20.71■□□□□ 0.91
ATP2A1O14983 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A1O14983 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A1O14983 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A1O14983 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A1O14983 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A1O14983 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A1O14983 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.7■□□□□ 0.9
ATP2A1O14983 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A1O14983 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
ATP2A1O14983 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A1O14983 AF186996.4-201ENST00000467186 377 ntBASIC20.7■□□□□ 0.9
ATP2A1O14983 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.7■□□□□ 0.9
ATP2A1O14983 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.7■□□□□ 0.9
ATP2A1O14983 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.7■□□□□ 0.9
ATP2A1O14983 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.7■□□□□ 0.9
ATP2A1O14983 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.7■□□□□ 0.9
ATP2A1O14983 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.7■□□□□ 0.9
ATP2A1O14983 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.7■□□□□ 0.9
ATP2A1O14983 AP001269.4-201ENST00000609611 512 ntBASIC20.7■□□□□ 0.9
ATP2A1O14983 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.7■□□□□ 0.9
ATP2A1O14983 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATP2A1O14983 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.7■□□□□ 0.9
ATP2A1O14983 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A1O14983 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A1O14983 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.7■□□□□ 0.9
ATP2A1O14983 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.7■□□□□ 0.9
ATP2A1O14983 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
ATP2A1O14983 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.7■□□□□ 0.9
ATP2A1O14983 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ATP2A1O14983 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A1O14983 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP2A1O14983 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A1O14983 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
ATP2A1O14983 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A1O14983 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP2A1O14983 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A1O14983 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A1O14983 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ATP2A1O14983 GMCL1P1-201ENST00000463439 1581 ntBASIC20.69■□□□□ 0.9
ATP2A1O14983 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ATP2A1O14983 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A1O14983 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A1O14983 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.69■□□□□ 0.9
ATP2A1O14983 AL031284.1-201ENST00000419297 478 ntBASIC20.69■□□□□ 0.9
ATP2A1O14983 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP2A1O14983 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP2A1O14983 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP2A1O14983 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ATP2A1O14983 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A1O14983 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A1O14983 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A1O14983 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A1O14983 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.69■□□□□ 0.9
ATP2A1O14983 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP2A1O14983 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A1O14983 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A1O14983 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP2A1O14983 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.69■□□□□ 0.9
ATP2A1O14983 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
ATP2A1O14983 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
ATP2A1O14983 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A1O14983 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A1O14983 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A1O14983 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP2A1O14983 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP2A1O14983 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATP2A1O14983 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A1O14983 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A1O14983 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A1O14983 AL590627.1-203ENST00000421194 1026 ntBASIC20.68■□□□□ 0.9
ATP2A1O14983 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP2A1O14983 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP2A1O14983 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.68■□□□□ 0.9
ATP2A1O14983 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.68■□□□□ 0.9
ATP2A1O14983 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATP2A1O14983 AC148477.8-201ENST00000624298 468 ntBASIC20.68■□□□□ 0.9
ATP2A1O14983 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.68■□□□□ 0.9
ATP2A1O14983 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A1O14983 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A1O14983 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A1O14983 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP2A1O14983 AC005082.1-201ENST00000413042 2259 ntBASIC20.67■□□□□ 0.9
ATP2A1O14983 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A1O14983 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A1O14983 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ATP2A1O14983 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP2A1O14983 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A1O14983 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ATP2A1O14983 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.67■□□□□ 0.9
ATP2A1O14983 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP2A1O14983 ABCD1P5-201ENST00000445663 754 ntBASIC20.67■□□□□ 0.9
ATP2A1O14983 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATP2A1O14983 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms