Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
RCCD1A6NED2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.27■□□□□ 0.68
RCCD1A6NED2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.27■□□□□ 0.68
RCCD1A6NED2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.27■□□□□ 0.68
RCCD1A6NED2 DUTP2-201ENST00000519164 463 ntBASIC19.27■□□□□ 0.68
RCCD1A6NED2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 AL353719.1-201ENST00000566847 864 ntBASIC19.27■□□□□ 0.68
RCCD1A6NED2 AP005242.2-201ENST00000580065 1175 ntBASIC19.27■□□□□ 0.68
RCCD1A6NED2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 ITM2C-210ENST00000620962 501 ntBASIC19.27■□□□□ 0.68
RCCD1A6NED2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RCCD1A6NED2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RCCD1A6NED2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RCCD1A6NED2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RCCD1A6NED2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.26■□□□□ 0.67
RCCD1A6NED2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.26■□□□□ 0.67
RCCD1A6NED2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.26■□□□□ 0.67
RCCD1A6NED2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RCCD1A6NED2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RCCD1A6NED2 AIRN-201ENST00000601203 4374 ntBASIC19.26■□□□□ 0.67
RCCD1A6NED2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RCCD1A6NED2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 AC098590.1-201ENST00000468126 897 ntBASIC19.26■□□□□ 0.67
RCCD1A6NED2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.26■□□□□ 0.67
RCCD1A6NED2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.26■□□□□ 0.67
RCCD1A6NED2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.26■□□□□ 0.67
RCCD1A6NED2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RCCD1A6NED2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.26■□□□□ 0.67
RCCD1A6NED2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RCCD1A6NED2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.25■□□□□ 0.67
RCCD1A6NED2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 AC233702.5-201ENST00000584107 538 ntBASIC19.25■□□□□ 0.67
RCCD1A6NED2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 AL049637.2-201ENST00000641778 930 ntBASIC19.25■□□□□ 0.67
RCCD1A6NED2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RCCD1A6NED2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.25■□□□□ 0.67
RCCD1A6NED2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCCD1A6NED2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 AC133963.1-201ENST00000504166 1679 ntBASIC19.24■□□□□ 0.67
RCCD1A6NED2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCCD1A6NED2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RCCD1A6NED2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RCCD1A6NED2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RCCD1A6NED2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms