Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 TP73-AS1-210ENST00000637775 1455 ntBASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SYNGAP1Q96PV0 SDHAP2-201ENST00000455183 2001 ntBASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 RBM17P3-201ENST00000417687 1192 ntBASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 AC148477.8-201ENST00000624298 468 ntBASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 AL024508.2-201ENST00000607749 1894 ntBASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
SYNGAP1Q96PV0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 AC009154.2-201ENST00000621177 724 ntBASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 MYLKP1-201ENST00000509077 1580 ntBASIC20.58■□□□□ 0.89
SYNGAP1Q96PV0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYNGAP1Q96PV0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.58■□□□□ 0.88
SYNGAP1Q96PV0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SYNGAP1Q96PV0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SYNGAP1Q96PV0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
SYNGAP1Q96PV0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SYNGAP1Q96PV0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 AC093909.1-201ENST00000504731 1122 ntBASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 SLC25A1P1-201ENST00000528351 927 ntBASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 AC009533.2-201ENST00000543664 586 ntBASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 AC139530.3-201ENST00000620344 690 ntBASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 AC099343.3-201ENST00000605834 2503 ntBASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.57■□□□□ 0.88
SYNGAP1Q96PV0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 FGFR3P6-201ENST00000457012 610 ntBASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SYNGAP1Q96PV0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms