Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.61■□□□□ 0.73
HERC6Q8IVU3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.6■□□□□ 0.73
HERC6Q8IVU3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 AC008735.5-201ENST00000623544 497 ntBASIC19.6■□□□□ 0.73
HERC6Q8IVU3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.6■□□□□ 0.73
HERC6Q8IVU3 AC125634.1-201ENST00000438758 1403 ntBASIC19.59■□□□□ 0.73
HERC6Q8IVU3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 MTCL1P1-201ENST00000446207 792 ntBASIC19.59■□□□□ 0.73
HERC6Q8IVU3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 AC009154.2-201ENST00000621177 724 ntBASIC19.59■□□□□ 0.73
HERC6Q8IVU3 AC134684.3-201ENST00000641758 218 ntBASIC19.59■□□□□ 0.73
HERC6Q8IVU3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 MTMR9LP-203ENST00000426597 1545 ntBASIC19.59■□□□□ 0.73
HERC6Q8IVU3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HERC6Q8IVU3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HERC6Q8IVU3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
HERC6Q8IVU3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.58■□□□□ 0.73
HERC6Q8IVU3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HERC6Q8IVU3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.58■□□□□ 0.73
HERC6Q8IVU3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HERC6Q8IVU3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.58■□□□□ 0.73
HERC6Q8IVU3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HERC6Q8IVU3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HERC6Q8IVU3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.58■□□□□ 0.73
HERC6Q8IVU3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HERC6Q8IVU3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.58■□□□□ 0.73
HERC6Q8IVU3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.58■□□□□ 0.72
HERC6Q8IVU3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HERC6Q8IVU3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms