Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tsen54Q8C2A2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Gm13186-201ENSMUST00000118031 316 ntBASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Efs-202ENSMUST00000227037 2540 ntBASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.79□□□□□ -0.36
Tsen54Q8C2A2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 AA414768-201ENSMUST00000121924 1257 ntBASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Gm25016-201ENSMUST00000158399 131 ntBASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tsen54Q8C2A2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tsen54Q8C2A2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.77□□□□□ -0.36
Tsen54Q8C2A2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tsen54Q8C2A2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.77□□□□□ -0.36
Tsen54Q8C2A2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tsen54Q8C2A2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tsen54Q8C2A2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tsen54Q8C2A2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Gm9013-201ENSMUST00000132939 882 ntBASIC12.77□□□□□ -0.37
Tsen54Q8C2A2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms