Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3rf2Q8BZT2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Gm15920-201ENSMUST00000118998 402 ntBASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Mir6990-201ENSMUST00000183724 91 ntBASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Gm10576-201ENSMUST00000191927 825 ntBASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Gm5312-201ENSMUST00000203728 547 ntBASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3rf2Q8BZT2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 App-207ENSMUST00000227737 2827 ntBASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3rf2Q8BZT2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Gm43474-201ENSMUST00000196415 774 ntBASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Sh3rf2Q8BZT2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sh3rf2Q8BZT2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms