Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Gm7370-201ENSMUST00000219471 767 ntBASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smco3Q8BQM7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco3Q8BQM7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smco3Q8BQM7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Gm715-201ENSMUST00000117865 831 ntBASIC12.58□□□□□ -0.4
Smco3Q8BQM7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Gm7213-201ENSMUST00000215977 950 ntBASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco3Q8BQM7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms