Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm22175-201ENSMUST00000175007 78 ntBASIC12.29□□□□□ -0.44
Lmo4P61969 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lmo4P61969 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.29□□□□□ -0.44
Lmo4P61969 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.29□□□□□ -0.44
Lmo4P61969 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lmo4P61969 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lmo4P61969 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lmo4P61969 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lmo4P61969 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lmo4P61969 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lmo4P61969 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lmo4P61969 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Lmo4P61969 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lmo4P61969 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lmo4P61969 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.29□□□□□ -0.44
Lmo4P61969 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Gm2810-201ENSMUST00000118681 990 ntBASIC12.28□□□□□ -0.44
Lmo4P61969 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Gm27430-201ENSMUST00000184585 107 ntBASIC12.28□□□□□ -0.44
Lmo4P61969 Gm44333-201ENSMUST00000197168 107 ntBASIC12.28□□□□□ -0.44
Lmo4P61969 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.28□□□□□ -0.44
Lmo4P61969 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lmo4P61969 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lmo4P61969 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.27□□□□□ -0.44
Lmo4P61969 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Lmo4P61969 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lmo4P61969 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lmo4P61969 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lmo4P61969 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lmo4P61969 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Lmo4P61969 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.27□□□□□ -0.44
Lmo4P61969 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lmo4P61969 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lmo4P61969 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lmo4P61969 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.27□□□□□ -0.45
Lmo4P61969 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.27□□□□□ -0.45
Lmo4P61969 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.27□□□□□ -0.45
Lmo4P61969 Gm15483-201ENSMUST00000120338 456 ntBASIC12.27□□□□□ -0.45
Lmo4P61969 Gm14057-201ENSMUST00000120631 482 ntBASIC12.27□□□□□ -0.45
Lmo4P61969 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.27□□□□□ -0.45
Lmo4P61969 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Lmo4P61969 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.27□□□□□ -0.45
Lmo4P61969 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.27□□□□□ -0.45
Lmo4P61969 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.27□□□□□ -0.45
Lmo4P61969 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Lmo4P61969 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Dancr-204ENSMUST00000132389 2347 ntBASIC12.27□□□□□ -0.45
Lmo4P61969 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.27□□□□□ -0.45
Lmo4P61969 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lmo4P61969 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Lmo4P61969 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmo4P61969 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.26□□□□□ -0.45
Lmo4P61969 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmo4P61969 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmo4P61969 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lmo4P61969 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmo4P61969 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmo4P61969 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmo4P61969 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.26□□□□□ -0.45
Lmo4P61969 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmo4P61969 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmo4P61969 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmo4P61969 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmo4P61969 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmo4P61969 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.26□□□□□ -0.45
Lmo4P61969 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms