Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Gm9013-201ENSMUST00000132939 882 ntBASIC17.28■□□□□ 0.36
Usp25P57080 Gm25406-201ENSMUST00000157599 105 ntBASIC17.28■□□□□ 0.36
Usp25P57080 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.28■□□□□ 0.36
Usp25P57080 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.28■□□□□ 0.36
Usp25P57080 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp25P57080 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.28■□□□□ 0.36
Usp25P57080 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp25P57080 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp25P57080 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Usp25P57080 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp25P57080 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Usp25P57080 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Usp25P57080 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Usp25P57080 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp25P57080 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.27■□□□□ 0.36
Usp25P57080 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp25P57080 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.27■□□□□ 0.35
Usp25P57080 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp25P57080 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.27■□□□□ 0.35
Usp25P57080 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp25P57080 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp25P57080 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp25P57080 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Usp25P57080 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp25P57080 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Usp25P57080 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.26■□□□□ 0.35
Usp25P57080 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.26■□□□□ 0.35
Usp25P57080 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp25P57080 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp25P57080 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp25P57080 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp25P57080 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp25P57080 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp25P57080 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.25■□□□□ 0.35
Usp25P57080 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.25■□□□□ 0.35
Usp25P57080 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp25P57080 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp25P57080 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Usp25P57080 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp25P57080 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp25P57080 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Usp25P57080 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp25P57080 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp25P57080 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp25P57080 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp25P57080 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.24■□□□□ 0.35
Usp25P57080 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp25P57080 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
Usp25P57080 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms