Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.92□□□□□ -0.34
Hist1h1dP43277 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Mir6982-201ENSMUST00000184354 68 ntBASIC12.92□□□□□ -0.34
Hist1h1dP43277 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hist1h1dP43277 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.92□□□□□ -0.34
Hist1h1dP43277 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.92□□□□□ -0.34
Hist1h1dP43277 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hist1h1dP43277 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1dP43277 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.91□□□□□ -0.34
Hist1h1dP43277 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.91□□□□□ -0.34
Hist1h1dP43277 Gm44454-201ENSMUST00000198541 138 ntBASIC12.91□□□□□ -0.34
Hist1h1dP43277 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hist1h1dP43277 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1dP43277 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.9□□□□□ -0.34
Hist1h1dP43277 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.9□□□□□ -0.34
Hist1h1dP43277 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Mir3081-201ENSMUST00000175305 84 ntBASIC12.9□□□□□ -0.34
Hist1h1dP43277 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1dP43277 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms