Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.32■□□□□ 0.84
HTTP42858 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.32■□□□□ 0.84
HTTP42858 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.32■□□□□ 0.84
HTTP42858 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTTP42858 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTTP42858 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTTP42858 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.31■□□□□ 0.84
HTTP42858 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.31■□□□□ 0.84
HTTP42858 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.31■□□□□ 0.84
HTTP42858 VN2R19P-201ENST00000442399 1052 ntBASIC20.31■□□□□ 0.84
HTTP42858 CEND1P1-201ENST00000451006 455 ntBASIC20.31■□□□□ 0.84
HTTP42858 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.31■□□□□ 0.84
HTTP42858 OR7E47P-204ENST00000575924 449 ntBASIC20.31■□□□□ 0.84
HTTP42858 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTTP42858 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTTP42858 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTTP42858 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.31■□□□□ 0.84
HTTP42858 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.31■□□□□ 0.84
HTTP42858 AC002472.2-201ENST00000442739 958 ntBASIC20.31■□□□□ 0.84
HTTP42858 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTTP42858 KRT19P2-202ENST00000557173 1012 ntBASIC20.31■□□□□ 0.84
HTTP42858 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTTP42858 AC091812.2-201ENST00000619081 385 ntBASIC20.31■□□□□ 0.84
HTTP42858 AL513210.1-201ENST00000629608 234 ntBASIC20.31■□□□□ 0.84
HTTP42858 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTTP42858 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTTP42858 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTTP42858 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
HTTP42858 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTTP42858 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTTP42858 AC092474.2-201ENST00000424288 719 ntBASIC20.31■□□□□ 0.84
HTTP42858 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.31■□□□□ 0.84
HTTP42858 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTTP42858 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTTP42858 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 UGT1A2P-201ENST00000454886 866 ntBASIC20.3■□□□□ 0.84
HTTP42858 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.3■□□□□ 0.84
HTTP42858 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.3■□□□□ 0.84
HTTP42858 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.3■□□□□ 0.84
HTTP42858 AC141586.3-201ENST00000562166 1838 ntBASIC20.3■□□□□ 0.84
HTTP42858 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HTTP42858 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTTP42858 AFG3L1P-217ENST00000557444 2447 ntBASIC20.3■□□□□ 0.84
HTTP42858 ADH5P3-201ENST00000433842 1137 ntBASIC20.29■□□□□ 0.84
HTTP42858 AC015911.4-201ENST00000588022 1070 ntBASIC20.29■□□□□ 0.84
HTTP42858 AC006557.2-201ENST00000592985 1240 ntBASIC20.29■□□□□ 0.84
HTTP42858 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.29■□□□□ 0.84
HTTP42858 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.29■□□□□ 0.84
HTTP42858 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.29■□□□□ 0.84
HTTP42858 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HTTP42858 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTTP42858 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HTTP42858 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.29■□□□□ 0.84
HTTP42858 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.29■□□□□ 0.84
HTTP42858 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.29■□□□□ 0.84
HTTP42858 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTTP42858 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HTTP42858 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HTTP42858 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTTP42858 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTTP42858 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTTP42858 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
HTTP42858 HLA-V-201ENST00000429037 534 ntBASIC20.29■□□□□ 0.84
HTTP42858 MTCL1P1-201ENST00000446207 792 ntBASIC20.29■□□□□ 0.84
HTTP42858 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.29■□□□□ 0.84
HTTP42858 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.29■□□□□ 0.84
HTTP42858 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.29■□□□□ 0.84
HTTP42858 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.29■□□□□ 0.84
HTTP42858 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTTP42858 ELK2BP-201ENST00000415014 1224 ntBASIC20.28■□□□□ 0.84
HTTP42858 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.28■□□□□ 0.84
HTTP42858 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTTP42858 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTTP42858 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HTTP42858 AC022145.2-201ENST00000598203 171 ntBASIC20.28■□□□□ 0.84
HTTP42858 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTTP42858 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.28■□□□□ 0.84
HTTP42858 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTTP42858 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HTTP42858 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTTP42858 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.28■□□□□ 0.84
HTTP42858 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTTP42858 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTTP42858 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.27■□□□□ 0.84
HTTP42858 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.27■□□□□ 0.84
HTTP42858 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.27■□□□□ 0.84
HTTP42858 AC093520.2-201ENST00000561830 333 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms